Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0798 ATGATGAAGAAATGGATTCAGAATCCATCATTGCTGCTAAAGGAAAAGAAGTTGTTTGTGAACTTAGTGAAATCTGAAGAAAAATCTGCCAACACAATTCAACCCCCCCTTCTTGTGTTTTTCTCACCTTCACAAGAAAGTATTGCCGACATCGAACCTCACTTAGAAACGATGTTTGAATCTGAGGCAGTTGCTTATGAATTTTATAATGAGTACAGTAAAAGAAATGGATTTGGTATTCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTTTGACTTCAAGAAGATTCACATGCTTCAAAGAAGGCACACGAGGTGTTGACAAACGACGTCAACCGACAGGGGAGCCTACAGCAGAAACTAGAACGGGATGTCTTGCACGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATATAAGGTAGTTGACTTTGTAGCTCAACATAACCACTCTCTTCAACCGCCAGAGCATGTCCACATGATTCGCTCTCATCGATGCATATCTGAGGCACAAGCATCACAAATTGTAATTGGAGATGAATCTGGATTAAAACCAAAAGATTTGTATGTATATATGTCCAAGCAGGCTGGTGGGATAGAGATGGTTGGCTTTACAAGCCAAGACCTTAAGAATTTGCTTCGAACAAAAAGGATGAAATCACTAAAGTATGGTGAAGTGGGCGCATTGATGACTTATTTCAAACAAGAAAGCGAAAATCCTTCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGAGGATGCACAAATGATAAATGATTATGGGTACTTTGGTGATGTCATCACTTTTGACACCACATACAAGACAAATAAGGATTATCGGCCGTTGGGAGTATTTGTTGGACTTAATAATCACCGACAAACAGTCATTTTTGGGGCAGCATTGTTATATGATGAAACAATTCCGTCTTTTCGATGGTTATTTGAAACTTTTCTCAAAGCAATGGGTGGAGAAAATCCTAAAACCATTCTAACAGATCAAGATGCCGCAATGGCTAATGCTATTTCTTTAGTTATGCCGGAAACATTTCATGGATTGTGCACTTGGCATATAAGACAGAACGCTTTAAGGCATGTGAACCATCTATATCAAAAGAGTTCTCACTTTTGTTCGGATTTTGAAGCATGCATAGATCTACATGAAGAGGAAGATGAACTTTTGAATGGATGGAACTCTTTACTTGCTGAGCATAATGTTTTGGAAGGTTCGTGGTTGCATATGATTTTTAAATTGAAGGAAAAATGGGCATGGACTTATGTTCGGAAAACTTTCACGGCAGGTATGAGATCTACACAATTAAGTGAGAGCTTTAATGCTGATTTGAAAAACCATTTGAAGTCCGATTTAAATTTGGTAGAATTTTTTACACACTTCAAAAGGGCTGTCAATGGTAAACGGAACAATGAGTCAAAAGCTGAATATGAGTCAAAACATAAGCTACCTAGATTGAAAATGAAGAAGGCTCGTATGCTCGTCCAAGCTGCAAATGTTTACACCCCAAAAATATTTGAGGAATTCCAAGAAGAATATGAGGAATATCAAGACACTTGCATAAAGGTGTTGAAAGAAGGTTTGTATGCTGTCACAAATTATGATAATGTAAAAGAGAGGATAGTTATAGGAAATCCTACTGAACAAAAAGTTTCTTGTGACTGCCGTAAATTTGAGACGCATGGCATCTTATGCAGTCATGCTTTGAAAGTTTTGGATGTCATGAATATTAAGTCAATTCCTGAACACTATATACTAAAGCGATGGACAAGAGATGCAAGATTACGGAGTAATCAAGATTGGAAAGCGAGGCATGTTGAATTAGACATGAAAGCCCATTTCATGAAGCGATACAATGAGTTATGTCATCCAATGCTTAAATTGATCAACAGAGCTTCAGAAACTCATGAAACTTACACATATTTGTCCAAAGTTTATGAAGAGTCCAGCAAAATAGTTGAAGATATGTTAGCCAAAAAATATGTGGGTGGAGAATCAAGTGGAACGGTTCATGTATCCATATCAATTGCAAATGAAAAAATTGACAACAATGTGGAAACTGTTGTCGGGGCAAAAGGCGTAAAGAAGCGAGATTGTTCACAGAGACAAACACATACGCTCACAAAAAAAAAGAGAAAATCGCAAGAAAATGTAGTACAATCGTCATCGCAACCACTTGACTGCAATTCAATTTCTCTCAATGGAGCTCACCATCAAGCTACAATTCACGGAACACACTCAAGTCAAGCTGACAATGGAACTCAATGTCAAACCACAATTCAAGGGACACAATCAAGCCAAGTTGATAATGGAACAATGAGTCACAATTATTAG 2376 0.3733 MMKKWIQNPSLLLKEKKLFVNLVKSEEKSANTIQPPLLVFFSPSQESIADIEPHLETMFESEAVAYEFYNEYSKRNGFGIRREYANKSKKDGVLTSRRFTCFKEGTRGVDKRRQPTGEPTAETRTGCLARMGISLDRKIGKYKVVDFVAQHNHSLQPPEHVHMIRSHRCISEAQASQIVIGDESGLKPKDLYVYMSKQAGGIEMVGFTSQDLKNLLRTKRMKSLKYGEVGALMTYFKQESENPSFFYDFQMDVEEQITNIFWEDAQMINDYGYFGDVITFDTTYKTNKDYRPLGVFVGLNNHRQTVIFGAALLYDETIPSFRWLFETFLKAMGGENPKTILTDQDAAMANAISLVMPETFHGLCTWHIRQNALRHVNHLYQKSSHFCSDFEACIDLHEEEDELLNGWNSLLAEHNVLEGSWLHMIFKLKEKWAWTYVRKTFTAGMRSTQLSESFNADLKNHLKSDLNLVEFFTHFKRAVNGKRNNESKAEYESKHKLPRLKMKKARMLVQAANVYTPKIFEEFQEEYEEYQDTCIKVLKEGLYAVTNYDNVKERIVIGNPTEQKVSCDCRKFETHGILCSHALKVLDVMNIKSIPEHYILKRWTRDARLRSNQDWKARHVELDMKAHFMKRYNELCHPMLKLINRASETHETYTYLSKVYEESSKIVEDMLAKKYVGGESSGTVHVSISIANEKIDNNVETVVGAKGVKKRDCSQRQTHTLTKKKRKSQENVVQSSSQPLDCNSISLNGAHHQATIHGTHSSQADNGTQCQTTIQGTQSSQVDNGTMSHNY* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0798 791 MobiDBLite consensus disorder prediction 757 791 - -
Mal3g0798 791 MobiDBLite consensus disorder prediction 710 730 - -
Mal3g0798 791 Pfam SWIM zinc finger 566 587 IPR007527 GO:0008270
Mal3g0798 791 MobiDBLite consensus disorder prediction 710 740 - -
Mal3g0798 791 ProSiteProfiles Zinc finger SWIM-type profile. 553 590 IPR007527 GO:0008270
Mal3g0798 791 SMART 26again6 565 592 IPR006564 GO:0008270
Mal3g0798 791 Coils Coil 520 540 - -
Mal3g0798 791 Pfam MULE transposase domain 277 371 IPR018289 -
Mal3g0798 791 Pfam FAR1 DNA-binding domain 67 157 IPR004330 -
Mal3g0798 791 PANTHER OS03G0181600 PROTEIN 46 672 - -
Mal3g0798 791 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 46 672 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0798 Mal-Chr3 31177318 31182430 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g0798 MULE 1.6e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0798 - - cam:101500125 1192.56