Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0742 ATGGCTGTGAATAGTTTTGATGAATTACCTGCTGGATTCAGGTTTGATCCAAGTGATGACGAGCTTGTCGATATTTTCCTGATGAAGAAGGTCCATAACCAACCTCTTCCATTGCATGATATTCAAGAATTTGATGTATGTCAGACTGAGCCATGGATGCTTCCAAGAGATAATAGGGCCTCTTTAGAGAATAGGAGGTACTATTTCTTTGATATTAGCAACTGTAGTTTCCAAAACATGGATACAAGAGCTGCTGGGAATGGTGAATGGAGGATAATTGAAAACAACAAGGATTTGGCTCTCCCAAACAATCATTTCATTGGTAGAAAGAACACTCTTGTTTACTGGAGAAAAAAAGGAAATCAATTTGTCAAGACACAATGGATGATGCATGAATTCCACATCGCTAGAATTGTGGAACCAAATAAGATCATCACACCAACTGTGATTGATCTCACGGTGGAGAATGCAAGTGTCTCAGCCCGGCCTCCTCCCTCCCCATGA 504 0.4067 MAVNSFDELPAGFRFDPSDDELVDIFLMKKVHNQPLPLHDIQEFDVCQTEPWMLPRDNRASLENRRYYFFDISNCSFQNMDTRAAGNGEWRIIENNKDLALPNNHFIGRKNTLVYWRKKGNQFVKTQWMMHEFHIARIVEPNKIITPTVIDLTVENASVSARPPPSP* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0742 167 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 136 - -
Mal3g0742 167 Pfam No apical meristem (NAM) protein 10 135 IPR003441 GO:0003677|GO:0006355
Mal3g0742 167 SUPERFAMILY NAC domain 6 136 IPR036093 GO:0003677|GO:0006355
Mal3g0742 167 ProSiteProfiles NAC domain profile. 9 151 IPR003441 GO:0003677|GO:0006355
Mal3g0742 167 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 9 136 - -
Mal3g0742 167 Gene3D NAC domain 18 150 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0742 Mal-Chr3 27982125 27983271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0742 9 144 NAC Transcription Factor Family AT3G04070 38.028 8.54e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal3g0742 NAM 1.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0742 - - cam:101501671 184.111