Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0736 ATGCCAGCCGGCCTGAACATGTCACTCGACGAAATGATGAACAACTCCACCTCTCACCACCGCCGTAACAACCACCTCTCTCACGGACCAACCCGCCACCACGCCGTTCGCAACCCTGTCCGAACAACGCCGTACTCCATTTCTCAGTTAGAGGTGATGGAAGTGAGTGATGATGATCATGGCGCTGTTGTTCATCCCAAGCCGAAACCAGTCGCGAAACTCTATTTGTCTAACTTGGATGAAAGGGTTTCCAACGAAGACATTCATCTGTTGTTCTCGGAAGAAGGTGAGTTGGAAGGGTATTCCCTTCATTATGATCAGTTTGGGAGATCAAAAGGAACAGCAGAAGTTGTCTTTACAAGGCAGTCTGATGCTCTAGCAGCCCTCAAGAGGTACAACAATATGAAGCTTGATGGAAAGACATTGCAAATTGAGCTTGTTGGAACAAGTTTGGTTACTCCTGCTGCTACAGCTCTTGGACAAAGTAGCTTACTGGGAAAACCAAATGATGCCTTTGCAAGGTGCAAAATTCCGATTCATGATCTTATGAGCTCTGGAAAAAGTTCGGTTGCTCCTGTTGATACGCCTCTCGGACAAAGTAGCTTACTGGGTAAACCAAATGTCTTTGCAAGGTGTGTAGTTCCGATTCCTAGTCTTATGAGCTCTGGAACAAGCTTGGTTACCACTGCTGATACCCCACTTGGTCAAAGCTTACTGGGAAGAACAAATGGTGTCTTCGTAAGGAAAGAAAGAAAAATTGGAGGTAGCAGGTACAATAATAGCTTTACACATGGCCATCTTCCAACAAAGAAGGACCATACACGTAAGGCATCTTTTGGAGAGACTGATCACGACTTTGAGAGGTATCACCTCCGCGCAGAAGCAAAACGCCATATCTCAAAATTGTCCGCTAAAGATCTTGATGACGACTTGGAGAAGTACCGCTCAGAGGCTAAGAAGATAAACAAATAA 972 0.4558 MPAGLNMSLDEMMNNSTSHHRRNNHLSHGPTRHHAVRNPVRTTPYSISQLEVMEVSDDDHGAVVHPKPKPVAKLYLSNLDERVSNEDIHLLFSEEGELEGYSLHYDQFGRSKGTAEVVFTRQSDALAALKRYNNMKLDGKTLQIELVGTSLVTPAATALGQSSLLGKPNDAFARCKIPIHDLMSSGKSSVAPVDTPLGQSSLLGKPNVFARCVVPIPSLMSSGTSLVTTADTPLGQSLLGRTNGVFVRKERKIGGSRYNNSFTHGHLPTKKDHTRKASFGETDHDFERYHLRAEAKRHISKLSAKDLDDDLEKYRSEAKKINK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0736 323 MobiDBLite consensus disorder prediction 21 35 - -
Mal3g0736 323 Gene3D - 66 148 IPR012677 -
Mal3g0736 323 SUPERFAMILY RNA-binding domain, RBD 66 146 IPR035979 GO:0003676
Mal3g0736 323 Coils Coil 304 323 - -
Mal3g0736 323 MobiDBLite consensus disorder prediction 15 36 - -
Mal3g0736 323 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 72 149 IPR000504 GO:0003723
Mal3g0736 323 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 6 317 - -
Mal3g0736 323 PANTHER THO COMPLEX SUBUNIT 4A 6 317 - -
Mal3g0736 323 SMART rrm1_1 73 145 IPR000504 GO:0003723
Mal3g0736 323 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 74 142 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0736 Mal-Chr3 27688323 27691692 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0736 74 147 Eukaryotic Initiation Factors Gene Family AT2G23350 35.135 1.61e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0736 K12881 - gmx:100785926 166.392