Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0697 ATGAAAAGGGGAAGAGAGGTTGATAGCATAACCATGGCAAATTGTTTGATGTTACTTTCTCGTGGAAGTGATCAATTTGAAGCCACATATTCATCTACCACTTCAAACAATCGTGTGTTTGAATGTAAAACATGTAATAGACAATTTCCTTCATTTCAAGCACTTGGTGGCCATAGGGCAAGTCACAAGAAGCCAAGGTTGATGGGGGATAATATTGATGGTCAATTGCTAAATACACCTCCAAAGCCTAAAACACACGAGTGTTCAATTTGTGGATTGGAGTTTGCAATAGGACAAGCTTTAGGTGGCCACATGAGGAGACATAGAGCTTCAAATATGCACAATTCTAATAATAATACTATGAGTTGTAGTAGTGGTGGTGGTGGTAGTAGTAGTCTTGATTCTTCACAAAAGATGAAAGCTAGAAACAAGAGAGTTTTGGTTTTGGATTTGGATTTGAATTTGACTCCCTTTGAGAATGATTTGGAGTTTCTGAAGATTGGAAAGGCAACTGCTAATTTGATTGATTATTTGCATTGA 540 0.3741 MKRGREVDSITMANCLMLLSRGSDQFEATYSSTTSNNRVFECKTCNRQFPSFQALGGHRASHKKPRLMGDNIDGQLLNTPPKPKTHECSICGLEFAIGQALGGHMRRHRASNMHNSNNNTMSCSSGGGGSSSLDSSQKMKARNKRVLVLDLDLNLTPFENDLEFLKIGKATANLIDYLH* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0697 179 PANTHER ZINC FINGER PROTEIN ZAT5 11 165 - -
Mal3g0697 179 SMART c2h2final6 40 62 IPR013087 -
Mal3g0697 179 SMART c2h2final6 86 108 IPR013087 -
Mal3g0697 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Mal3g0697 179 ProSitePatterns Zinc finger C2H2 type domain signature. 88 108 IPR013087 -
Mal3g0697 179 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Mal3g0697 179 Pfam C2H2-type zinc finger 86 110 - -
Mal3g0697 179 Pfam C2H2-type zinc finger 39 65 - -
Mal3g0697 179 PANTHER ZINC FINGER PROTEIN ZAT12 11 165 - -
Mal3g0697 179 MobiDBLite consensus disorder prediction 112 137 - -
Mal3g0697 179 MobiDBLite consensus disorder prediction 109 137 - -
Mal3g0697 179 SUPERFAMILY beta-beta-alpha zinc fingers 38 108 IPR036236 -
Mal3g0697 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 86 113 IPR013087 -
Mal3g0697 179 Gene3D Classic Zinc Finger 20 71 - -
Mal3g0697 179 Gene3D Classic Zinc Finger 76 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0697 Mal-Chr3 26236247 26236786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0697 1 169 C2H2 Transcription Factor Family AT2G28710 44.199 1.13e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal3g0697 zf-C2H2_6 7.4e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0697 - - gmx:100500371 259.225