Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0681 ATGGCAAATTTTTCCCCTCAACCACTCTCAATGAAGACCGATGCATCATTTGCAACTCCTCTAGGTTCTTCTACCCAGGCTAACACCACTGCCCATAGCATGGCGTCCATGGAACAACTTATTCTTGAACTCAACAATCCCAATCTCAGGGAAAATGCTCTTCATGTTCTCTCCAAGAGGACTGAGTTATTTCATGAACTTGCACCTTTATTATGGCATTCTTGTGGTACTATTACAATACTTTTACAGGAAATAATTTCAATATACCCTACTCTTTCGATGCTCAATCTTACTCAGGCACAATCAATTAGAGGGTGCAATGTTCTTGCACTACTCAAGTGTGTGGCATCTCACCCTAATACCAAAATGCTATTCCTTAACGCTAATATTCCTTTATATTTATATCCATTCCTTCAAACAACAAGTGAGTTAACACAATTTGAGCATTTGAGGCTTGCTAGTCTTGGAGTCATCGGTGCCTTGGTGAAGGTTAACACCAAAGAAGACATAAATTTTCTTCTTTCAAACGAGATAATTCCATTATGCTTACGCAGTATGGAAATCGGCAAAGAATTATCAAAAACTGTTGCAACATTTATAATTCAGAAAATTTTGTTAGATGATGATGGCTTGGCTTATGTTTGTGCTACAGCAGAGCGATTTTTTGCAGTAGTTCAAGTTCTGAACATGATGTTGGAAAGTCTCGAAAGTCAACCTTCACCTCGTTTGTTGAAGCTTATAATTCCATGCTATACGCTTTTGTCTCAACATCACAGAGCTCGCGATGCATTAACAAGGCGTTTTCCAAACATGCTAAAAAATGCCAATTTCATCAATTGTCTTCGTGAAGATCAAACAACTTGGTGGTGGCTAAATAAGTTGCATGAAAATATTGGGGTGAACTAG 906 0.383 MANFSPQPLSMKTDASFATPLGSSTQANTTAHSMASMEQLILELNNPNLRENALHVLSKRTELFHELAPLLWHSCGTITILLQEIISIYPTLSMLNLTQAQSIRGCNVLALLKCVASHPNTKMLFLNANIPLYLYPFLQTTSELTQFEHLRLASLGVIGALVKVNTKEDINFLLSNEIIPLCLRSMEIGKELSKTVATFIIQKILLDDDGLAYVCATAERFFAVVQVLNMMLESLESQPSPRLLKLIIPCYTLLSQHHRARDALTRRFPNMLKNANFINCLREDQTTWWWLNKLHENIGVN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0681 301 Pfam Cell differentiation family, Rcd1-like 40 298 - -
Mal3g0681 301 Gene3D - 29 299 IPR011989 -
Mal3g0681 301 SUPERFAMILY ARM repeat 40 272 IPR016024 -
Mal3g0681 301 PANTHER UNCHARACTERIZED 6 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0681 Mal-Chr3 25893267 25912470 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Mal3g0681 Rcd1 1.5e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0681 K12606 - tcc:18589742 354.369