Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0672 ATGGCTCCTACAAAGGGGGATAATGCAAAAAAAGCTGATCCCAAAGCTCAGGCCTTGAAGACTGCCAAGGCTGTGAAATCTGGTCAAGTGATTAAGAAGAAAGCTAAGAAGATTAGAACAACTGTCACATTTCACCGGCCAAAGACACTGTCGAAGGAAAGGAACCCTAAGTATCCCCGCATTAGTGCAACACCAAGAAACAAGTTGGACCATTATCAAATTCTTAAATTTCCTCTAACTACTGAGTCTGCAATGAAGAAAATTGAAGATAACAACACACTTGTTTTTATTGTCGACCTTCGTGCTGATAAAAAGAAAATTAAAGATGCTGTGAAGAAAATGTATGACATTCAAGCCAAGAAAGTGAACACCTTGATCAGGCCTGATGGTACAAAGAAAGCCTATGTTCGGTTGACTCCAGATTATGATGCATTGGATGTTGCCAACAAAATTGGTATCATCTAA 465 0.3935 MAPTKGDNAKKADPKAQALKTAKAVKSGQVIKKKAKKIRTTVTFHRPKTLSKERNPKYPRISATPRNKLDHYQILKFPLTTESAMKKIEDNNTLVFIVDLRADKKKIKDAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0672 154 Gene3D - 35 154 IPR012677 -
Mal3g0672 154 Hamap 50S ribosomal protein L23 [rplW]. 74 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Mal3g0672 154 PANTHER 60S RIBOSOMAL PROTEIN L23A-2 1 154 - -
Mal3g0672 154 ProSitePatterns Ribosomal protein L23 signature. 132 147 IPR001014 -
Mal3g0672 154 MobiDBLite consensus disorder prediction 1 27 - -
Mal3g0672 154 PANTHER 60S RIBOSOMAL PROTEIN L23A 1 154 IPR013025 GO:0003735|GO:0005840|GO:0006412
Mal3g0672 154 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 71 147 IPR012678 GO:0003735|GO:0005840|GO:0006412
Mal3g0672 154 TIGRFAM uL23_arch: ribosomal protein uL23 78 154 IPR019985 GO:0003735|GO:0005840|GO:0006412
Mal3g0672 154 Pfam Ribosomal protein L23, N-terminal domain 15 63 IPR005633 -
Mal3g0672 154 Pfam Ribosomal protein L23 74 136 IPR013025 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0672 Mal-Chr3 25674763 25677017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0672 1 154 Cytoplasmic Ribosomal Protein Gene Family AT2G39460 87.662 5.56e-70 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0672 K02893 - gmx:100777933 283.108