Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0670 ATGGTGGGTAACGACGATGCTCGAGCTCCATGCCACCTTTCAAATTCCCGCAAAATGTTTTGGCGTTCGGCTTCATGGTCTTCCGCCCGTTCCGCCGCCGCGAATCCTACCGGTGAACCGGAATCGAATTTCACCGATCCGAATTCCGGTGGTGGGGAGAATACTAACCGGAGATTCCCTCCACCGCCGTTGACGCCGAGGTCACAGCAGAATTGTAAGGCGCGTTCGTCGTGTCTGCCGCCGCTTCAGCCGCTTTCGATTGCTCGCCGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGACGATATCGGGGAGTGGCCACAACCACCTATTACTCCTGGTGGAAGAGGTAATGGTAATAGCAGTAGTAGTAGTAGTAATTGTAGTAATAATGGTGAAAGGTTGAAACTTGATTTGTCTTCAATTCAGCAGAATAATAATCCTGATAGTAGAAATAATGGTGGACTTGTGAAGAGAGATAAGATTGCTTTTTTTGATAAAGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAGGGATAGGGAAATTTTGAAAAGGAATGGGATTACTCATGTATTGAATTGTGTTGGTTTTGTGTGTCCTGAGTATTTTAAAGGTGATTTTGTGTATAGGACTTTGTGGTTACAAGATAGTCCTAGTGAGGATATTACTAGTATTTTGTATGATGTGTTTGATTACTTTGAGGATGTTAGGGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCGAGGTCGACGTCTCTTGTTATTGCTTATCTTATGTGGAGGGAAGGGCAGAGTTTCGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGTATTGCCGATCCGAATATGGGTTTCGCTTGTCAGTTGTTGCAGTGTCAGAAAAGGGTTCATGCGTTTCCGCTTAGTCCTAGCTCTTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACGGATCCGTCTTCGTCGGCTTTGGACTCTAGAGGTGCGTTTATTGTGCACATTCCTTCGGCGATATATGTTTGGATTGGTAAGTATTGTGAGCCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGGTCAGATTGTCCGGTATGAGAGAGTGCAAGGATCAATTATCATGATTAAGGAAGGTGAGGAACCACCTTCCTTTTGGGATGCTTTTTCGAAGTTTTTGCCTTTGATGGATATGAGTGGCAGTAGAGTAGAAAGTAGCAAATCAAGTGTTAGAATTTTTTCTAGTGAGAGGAAAGTGGATGCGTACGATGTTGATTTTGAAGTTTTCAGAAAAGCTATCGTGGGAGGTTTTGTGCCTCCCTTTGCATCATCGGAGAATGAACATGAAACCCATCTTCCTGCAAGAGAGAGTAGTTGGAGTGTTTTAAGGCGGAAAAATTCCTGTCCTGATGTGAAGGAGTTTCTCTCAGCCCCTAAGTTATCATTCCCGCGGGTTTATTCGGATTCCATGTTGTGTATTCATACATCTGCAAATTCATTTCCATCACCTTCAATGTCGTCAACTGACTCATCTTTATCATCATCCTCTTCACCTCCTTTTGTCTCTCCAGATTCCTTTTCTTCTGATTCTAGCAATCACTCAAAGTTGTTGTTAGAATTATCCCCAGATTCTTCCTCTCTCGTTTTTTCACCTGTTCCAGTATCTTCATCTTTGTCTAACTTCTCTAATTTGTCCCTAGTGTCAAATTCTAGTTCTCAACCAGTGTCTAACTGTACAGATATCCATGGTGTCAAGCTATCACCACATCTATGTTCTCAGTCTGCCTCTTTACCATTGAAAAAACCATCAAATTCCATTGCTGAACGCAGAGGTAGTTTATCGAAGTCTTTGAAGTTGCCTCTCATGAATGATAACACAAAAAGAATAGATAAACCATCAACTATTTCTTCCAGTCGGGAACATGGTGTTATTGCTAACAGCAACTTTAGTTGCGTGCAAGATTCAGACAGTATAGAGTATTTGTTCGAGTCTACCGCTCATGTCAAAGATGGAGGTACGAATTCAATTCGACAGTGTGAACCAGCATCATGTCCAGACATTGTTGATAGTGCGGGCTGCAATGAATCATCACTTCTCAGGAACTGTGTTGATCCTTCAGTAGATAGTTTGTCTGGAGAAGATTTGAAGTCTGCCTCATCAAAGGGAGATTACGAGAGTGGCTCATTGCAATGTAGTGACATACAAAGTTTAGTATATCGCTGGCCAAGTTTAGAAAAGATTGAGGCATTTGGTGCAAGTCATTTGGGTTCGGAGGCTGCTTTTGCCGTATTTTCTCCAAGCATACATATGCATGCAGGAAACATTTTGTATATTTGGGTAGGGAGTTCTTTCAAACTGGATGCTTTGCAGGTTCGGTTAGATAGTGATGAGCGGTCTGATTTGATTGGAGCAGTTGAATGGAACAGAATTGGTTGTGATCTTCTTGCTCAGCTTAATTTGCCGAACAATACAGTCACTAAGATTGTTAAAGAGAATGAAGAACCGCGGGAGTTCCTTGCTTTGCTGAGTTCATTGTAG 2604 0.4293 MVGNDDARAPCHLSNSRKMFWRSASWSSARSAAANPTGEPESNFTDPNSGGGENTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGNSSSSSSNCSNNGERLKLDLSSIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVARDREILKRNGITHVLNCVGFVCPEYFKGDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSSALDSRGAFIVHIPSAIYVWIGKYCEPIMERDARGAAGQIVRYERVQGSIIMIKEGEEPPSFWDAFSKFLPLMDMSGSRVESSKSSVRIFSSERKVDAYDVDFEVFRKAIVGGFVPPFASSENEHETHLPARESSWSVLRRKNSCPDVKEFLSAPKLSFPRVYSDSMLCIHTSANSFPSPSMSSTDSSLSSSSSPPFVSPDSFSSDSSNHSKLLLELSPDSSSLVFSPVPVSSSLSNFSNLSLVSNSSSQPVSNCTDIHGVKLSPHLCSQSASLPLKKPSNSIAERRGSLSKSLKLPLMNDNTKRIDKPSTISSSREHGVIANSNFSCVQDSDSIEYLFESTAHVKDGGTNSIRQCEPASCPDIVDSAGCNESSLLRNCVDPSVDSLSGEDLKSASSKGDYESGSLQCSDIQSLVYRWPSLEKIEAFGASHLGSEAAFAVFSPSIHMHAGNILYIWVGSSFKLDALQVRLDSDERSDLIGAVEWNRIGCDLLAQLNLPNNTVTKIVKENEEPREFLALLSSL* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0670 867 MobiDBLite consensus disorder prediction 24 55 - -
Mal3g0670 867 CDD DSP 169 303 - -
Mal3g0670 867 SMART VILL_6 317 414 IPR007122 GO:0051015
Mal3g0670 867 ProSiteProfiles Dual specificity protein phosphatase domain profile. 168 310 IPR020422 GO:0006470|GO:0008138
Mal3g0670 867 SMART dsp_5 168 307 IPR020422 GO:0006470|GO:0008138
Mal3g0670 867 MobiDBLite consensus disorder prediction 24 80 - -
Mal3g0670 867 ProSitePatterns Tyrosine specific protein phosphatases active site. 252 262 IPR016130 GO:0016311|GO:0016791
Mal3g0670 867 Gene3D Protein tyrosine phosphatase superfamily 142 310 IPR029021 -
Mal3g0670 867 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 227 288 IPR000387 GO:0016311|GO:0016791
Mal3g0670 867 Pfam Dual specificity phosphatase, catalytic domain 176 306 IPR000340 GO:0008138|GO:0016311
Mal3g0670 867 MobiDBLite consensus disorder prediction 93 133 - -
Mal3g0670 867 MobiDBLite consensus disorder prediction 114 133 - -
Mal3g0670 867 SUPERFAMILY Actin depolymerizing proteins 315 420 - -
Mal3g0670 867 PANTHER MKPA PROTEIN 1 861 - -
Mal3g0670 867 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 163 309 IPR029021 -
Mal3g0670 867 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 861 - -
Mal3g0670 867 Gene3D Severin 319 415 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0670 Mal-Chr3 25607451 25610900 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0670 1 204 Protein tyrosine phosphatase (PTP) family AT3G55270 58.373 6.61e-62 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0670 - - mtr:MTR_7g023250 1485.7