LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g0631	ATGTCATCTCATTCAAGCACTCTTGAGTACTCATTTAATGAGGAGACATGCACCTACGACGAAGTTAATGTTGGTCAGGCATGGAGTGGAGTTCCATGGTCTGAGGCCGGTGTTGACCCGAGCGCAATTGCTCCATTCTCTTTTGTCAGTCGATTGGACTCTCCATGGTCAAAAACCATCGAGAACTTCGCCAATGCAACCGGAGAACAAGGCTACCTAGGTGGAAAATTCTTTGATCCATTGTCCCTTGCTGGCGCCATCGAAAATGGAGTTTACATTCCAAATACAGAGAAGCTAGAGAGATTGAAACTGGCTGAGATTAAGCATGCTAGGCTTGCTATGTTGGCTATATGCTGA	357	0.4594	MSSHSSTLEYSFNEETCTYDEVNVGQAWSGVPWSEAGVDPSAIAPFSFVSRLDSPWSKTIENFANATGEQGYLGGKFFDPLSLAGAIENGVYIPNTEKLERLKLAEIKHARLAMLAIC*	119

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g0631	118	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	22	52	IPR001344	GO:0009765\|GO:0016020
	Mal3g0631	118	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	53	117	IPR001344	GO:0009765\|GO:0016020
	Mal3g0631	118	Gene3D	Chlorophyll a/b binding protein domain	7	118	-	-
	Mal3g0631	118	Pfam	Chlorophyll A-B binding protein	27	117	IPR022796	-
	Mal3g0631	118	SUPERFAMILY	Chlorophyll a-b binding protein	69	117	-	-
	Mal3g0631	118	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC	22	52	-	-
	Mal3g0631	118	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC	53	117	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g0631	Mal-Chr3	23567004	23567552	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g0631	22	118	Chloroplast and Mitochondria Gene Families	AT1G15820	55.200	2.36e-38	127

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g0631	K08917		-	gmx:100500118	147.132

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