Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0626 ATGGAAAGAGGCGGTTTCAGAAACACAACCGGCGGTTATAACCGCAACGGTAATGGCGGTGGTGGTGGCAGAGGAAGAGGAAGAGGAAGAGACTTTCACGTCCAACACCAATCAAGTCCTGGTGCTGGTCGTGGTGGTCAAGCGTTTCCTCAACAATCGCAACATAGTTGGCAACAAAGGTCACACCCACCTTCCTCTTTACCTCAAAGTTCGTCTTCTACTTCTCCTCCGATCACTAAACCCAACAACAACCATCAACTTCAAACTCGTCCACGTCCAGACATTGGAGCTCTGAAAATAAAAGAGCAGCCTGTGGAAAACACCGTAATCAGACCCATTTTCCGGCCTGACAAGGGAGGGACAGTGTCAATTCGTGACTGCAGACTTCGTGTGAATCATTTTCCGGTTACCTTCAATCCACAAAGCATTATCATGCACTATGATGTGGATGTGAAGGCTACTTTGCCACCGAAAAAGGGTTTGTCTCCGAAGAAGATTTCCAAGTCTGACTTGTCTATGATCAGGGACAAATTGTTTGCTGATCATCCTCAGATACTGCCTTTGTTGAAGACTGCTTATGATGGAGAAAAAAGCATCTTTAGTGCTGTGCCATTGCCTGAAGAAACTTTTACTGTGGAGGTCTCGAAAGGAGAAGATGAAAGAGCTGTTTCTTATACAGTTACTATAAAGCTGGTGAACAAACTCGAGCTTCGCAAGTTGAGAGATTACCTTAGTGGCAGAGTGTATTCCATTCCGAGGGATATTTTACAAGGAATGGACTTAGTGGTGAAGGAGAATCCGGCAAGGCTCACGGTTTCTTTAGGACGATGTTTCTTTCCAACCAATCCTCCCTTGATGCAAAGGGATCTTGAACCCGGAATAATTGCAATTGGAGGGTTTCAACATAGTCTCAAGACCACGGCTCAGGGCTTATCTTTGTGTCTTGACTATTCAGTTTTGTCTTTTCGAAAGAAAATGTCGGTCTTGGATTTCCTCCATGATCATATAAGAGGTTTCAATTTGGCTGAGTTCAGAAAATATAAGAAAGTGGTCGAGGAGGTACTCTTGGGATTGAAAGTAAATGTCACTCACAGAAGAACCAAACAGAAATACACCATTGCTAGGTTAACACCTAACGATACACGCCACATCACTTTCCCTATTTTGGACCAAGAGGGCCAAAACCCCCCTAGAAGCACCTCTCTTCTTGCCTACTTTAAAGATAAACATGGCATTGATATTGAATACAAAGATATTCCTGCCTTGGATTTTGGGGGAAACAAGATTAATTTCGTGCCTATGGAGCTATGCGTCTTGGTTGAGGGTCAGAGATTTCCCAAAGAGTATTTGGACAAGAATGCTGCCAAGAACTTGAAAAATATGTGCTTGGCTAGTCCAAGGGACAGGGAATCTACAATACAAATGATGATGAAATCCGGTGATGGACCGTGCGGCGGTGGTATTCTTCAGAATTTTGGAATGAATGTCAACACTTCCATGACAAATGTGAACGGACGTGTAATTGGGCCTCCAATGTTGAAGTTAGGCGATCCACGTGGAAAGAGTGCTCCTATGAAACTGGATCCAGAGAAATGCCATTGGAATCTAGTTGGAAAGTCAATGGTAGAAGGAAAAGCTGTTGAATGTTGGGGAATCCTTGATTTTACCAGCAATGCACCTAATTGGTGCAAATTAAGAGGCAATCAGTTCGTTAACAATCTTATGGATAAGTACAGAAAGTTGGGCATTCACATGAACGAACCTGTTTTGCACGAGTATTCTGCAATGTGGAAACTTGGGGATTACAATTTACTATGTGAATTACTTGAAAAAATAAATGAAAAGGTTCAAAAAAAATGTCGGCGGCGGCTGCAATTTCTTCTTTGTGTGATGGCCAACAAGGATCCAGGTTACAAGTGCCTCAAGTGGATTGCTGAGACTAAGGTTGGCATAGTGACACAGTGCTGCTTATCTCCTAGTGCTAATGAAGGGAAAGACCAATATCTCACAAATCTTTCTCTGAAAATCAATGCAAAAATTGGAGGCAGTAACGTAGAGCTCATTAATAGGCTCCCACACTTTGAGGATGAAAGTCATGTTATGTTTATAGGGGCTGATGTCAATCATCCAGGTTCTCGGGACACAAATAGTCCATCAATTGTTGCGGTAGTTGCCACTACTAACTGGCCAGCTGCAAATCGCTATGCAGCACGTGTTTGCGCTCAAGAGCATCGAATGGAGAAAATTTTGAATTTTGGAGATATTTGCCTTGACCTTGTTACACATTATGAGAAATTGAACAAAGCCAGGCCCCAAAAAATTGTTATCTTTCGTGATGGTGTTAGTGAGAGCCAATTTCACATGGTTCTTGGCGAGGAGTTGAAAGATTTGAAGACTGTATTTCAGCACTCAAATTACTTTCCAACTATCACTCTTATTGTAGCTCAAAAACGACATCAAACTCGATTGTTTCCTACAGGCGTGAAGGAGGGGACTCCTAGTGGAAATGTGTTCCCTGGAACAGTTGTGGACACAAAGGTCGTACATCCTTTTGAATTTGACTTTTACCTTTGTAGTCACTATGGAAGCCTAGGTACAAGCAAGCCCACTCACTATCATGTCTTATGGGATGAGCACAAGTTTACTTCTGATAACTTGCAGAAGCTCATATATGATATGTGCTTTACCTTTGCAAGGTGCACTAAACCTGTATCTTTAGTCCCTCCAGTGTACTATGCTGACCTTGCTGCATATAGAGGAAGACTATACTATGAAGCAAGGATGTCAACTCAATCTCCATATTCAACTGTATCTTCTTCATCATCTCCTTTAGCTTCTTCATCCATTTCATCCACCGCCTCAATTTCAAATGATCCAGGGTTTTACAAGCTGCATCCTGATACCGAAAACGGAATGTTCTTCGTCTGA 2928 0.4252 MERGGFRNTTGGYNRNGNGGGGGRGRGRGRDFHVQHQSSPGAGRGGQAFPQQSQHSWQQRSHPPSSLPQSSSSTSPPITKPNNNHQLQTRPRPDIGALKIKEQPVENTVIRPIFRPDKGGTVSIRDCRLRVNHFPVTFNPQSIIMHYDVDVKATLPPKKGLSPKKISKSDLSMIRDKLFADHPQILPLLKTAYDGEKSIFSAVPLPEETFTVEVSKGEDERAVSYTVTIKLVNKLELRKLRDYLSGRVYSIPRDILQGMDLVVKENPARLTVSLGRCFFPTNPPLMQRDLEPGIIAIGGFQHSLKTTAQGLSLCLDYSVLSFRKKMSVLDFLHDHIRGFNLAEFRKYKKVVEEVLLGLKVNVTHRRTKQKYTIARLTPNDTRHITFPILDQEGQNPPRSTSLLAYFKDKHGIDIEYKDIPALDFGGNKINFVPMELCVLVEGQRFPKEYLDKNAAKNLKNMCLASPRDRESTIQMMMKSGDGPCGGGILQNFGMNVNTSMTNVNGRVIGPPMLKLGDPRGKSAPMKLDPEKCHWNLVGKSMVEGKAVECWGILDFTSNAPNWCKLRGNQFVNNLMDKYRKLGIHMNEPVLHEYSAMWKLGDYNLLCELLEKINEKVQKKCRRRLQFLLCVMANKDPGYKCLKWIAETKVGIVTQCCLSPSANEGKDQYLTNLSLKINAKIGGSNVELINRLPHFEDESHVMFIGADVNHPGSRDTNSPSIVAVVATTNWPAANRYAARVCAQEHRMEKILNFGDICLDLVTHYEKLNKARPQKIVIFRDGVSESQFHMVLGEELKDLKTVFQHSNYFPTITLIVAQKRHQTRLFPTGVKEGTPSGNVFPGTVVDTKVVHPFEFDFYLCSHYGSLGTSKPTHYHVLWDEHKFTSDNLQKLIYDMCFTFARCTKPVSLVPPVYYADLAAYRGRLYYEARMSTQSPYSTVSSSSSPLASSSISSTASISNDPGFYKLHPDTENGMFFV* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0626 975 ProSiteProfiles Piwi domain profile. 626 925 IPR003165 GO:0003676
Mal3g0626 975 Gene3D - 507 688 - -
Mal3g0626 975 SMART PAZ_2_a_3 326 473 IPR003100 GO:0005515
Mal3g0626 975 SMART Piwi_a_2 626 925 IPR003165 GO:0003676
Mal3g0626 975 CDD Piwi_ago-like 488 924 IPR045246 -
Mal3g0626 975 Pfam Argonaute linker 1 domain 274 324 IPR014811 -
Mal3g0626 975 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 105 974 - -
Mal3g0626 975 SMART DUF1785_2 272 325 IPR014811 -
Mal3g0626 975 Pfam Piwi domain 627 924 IPR003165 GO:0003676
Mal3g0626 975 Pfam PAZ domain 346 453 IPR003100 GO:0005515
Mal3g0626 975 CDD PAZ_argonaute_like 326 440 - -
Mal3g0626 975 MobiDBLite consensus disorder prediction 40 90 - -
Mal3g0626 975 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 105 974 - -
Mal3g0626 975 ProSiteProfiles PAZ domain profile. 326 441 IPR003100 GO:0005515
Mal3g0626 975 Pfam N-terminal domain of argonaute 125 262 IPR032474 -
Mal3g0626 975 SUPERFAMILY PAZ domain 322 478 IPR036085 GO:0005515
Mal3g0626 975 Gene3D paz domain 321 445 - -
Mal3g0626 975 MobiDBLite consensus disorder prediction 1 98 - -
Mal3g0626 975 Gene3D - 695 975 IPR036397 GO:0003676
Mal3g0626 975 SUPERFAMILY Ribonuclease H-like 610 925 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0626 Mal-Chr3 23379924 23385396 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0626 66 929 Eukaryotic Initiation Factors Gene Family AT1G48410 34.236 6.66e-150 470