Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0620 ATGGCTACTACAACTGCAACTAGGTCTTTTCTTCAAGCTGTTGCAACGGAAGAGGTTGCAACTCCTCTTAGAGTTGTTCAGATGGAAGGATTGGTTATCCTGAAGATAATTAAGCATTGTAAGGACCACTCACCTTCTTTAGTCACTGGACAACTTCTGGGGTTGGATGTAGGCAGTGTTCTGGAAGTTACTAACTGCTTCCCTTTTCCGATGAGGGAGGAGGATGAGGAAATTGAAGCTGATGGTGCCAATTACCAGCTTGAAATGATGAGGTGCTTGAGAGAGGTCAATGTGGACAATAATACCGTTGGATGGTACCAGTCTACATTGCTTGGCTCCTATCAAACTGTGGAGCTGATTGAAACCTTTATGAATTACCAGGAGAATATTAGACGCTGTGTTTGCATAATATATGACCCATCACGGGCTGATCAAGGTGTCCTAGCTCTGAAGGCCTTGAAGCTTTCAGACTCATTCATGGAGCTGTATCGCAGCAATAATTTTACTGGCGAGAAATTGAGGGAGAAGAACTTATCATGGGTGGATATCTTCGAGGAAATACCCATCAAAGTTTCAAATTCTGCCCTTATCAGTGCTTTTATGACTGAGCTGGAACCTGATACTCCAGTCACCCAGTGTGATTATGATCGTCTGCAACTGTCAACCAGTTCACTAATGGAGAGAAATATGGAATTTTTGATTGAATGCATGGATGACTTGTCAATGGAGCAACAAAAGTTTCAATTCTATTATCGGAGCTTGTCTCGTCAGCAGGCTCAGCAGCAAGCATGGCTTCAGAAGAGAAGGGCTGATAACATGGCACGCAGAGCTGCTGGGGAAGATCCTTTACCCGAGGAAGATCCTGCAAACCCCATTTTCAAGCCGATTGCCGAGCCAACACGACTTGAGAGTTTCCTCATAACAAATCAAATTTCCAACTATTGCAACCAAATCAATGGGGTCGCAGGGCAAAGCTTTAACAGACTCTATTTGCTGAAGGCTTTACATGAGGAGGATTAA 1020 0.4382 MATTTATRSFLQAVATEEVATPLRVVQMEGLVILKIIKHCKDHSPSLVTGQLLGLDVGSVLEVTNCFPFPMREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSYQTVELIETFMNYQENIRRCVCIIYDPSRADQGVLALKALKLSDSFMELYRSNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSMEQQKFQFYYRSLSRQQAQQQAWLQKRRADNMARRAAGEDPLPEEDPANPIFKPIAEPTRLESFLITNQISNYCNQINGVAGQSFNRLYLLKALHEED* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0620 339 Pfam C-terminal region of eIF3h 145 337 IPR045810 -
Mal3g0620 339 MobiDBLite consensus disorder prediction 270 293 - -
Mal3g0620 339 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 21 338 IPR027524 GO:0003743|GO:0005737|GO:0005852
Mal3g0620 339 Gene3D Cytidine Deaminase, domain 2 2 214 - -
Mal3g0620 339 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 24 127 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mal3g0620 339 ProSiteProfiles MPN domain profile. 26 159 IPR037518 -
Mal3g0620 339 SMART pad1_6 25 158 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mal3g0620 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT H 4 337 - -
Mal3g0620 339 CDD MPN_eIF3h 24 287 IPR027524 GO:0003743|GO:0005737|GO:0005852
Mal3g0620 339 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 4 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0620 89 337 Eukaryotic Initiation Factors Gene Family AT1G10840 84.739 5.61e-158 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0620 K03247 - gmx:100795273 620.542