Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0601 ATGGCTTCAAGCAGCAGCAATAGCTTCTCTTCAGTTTTGACGACATTGCCAAATAATGATTATTATGATGTGTTTGTTAGCTTTAGAGGTAAAGACACGCGCCATAGTTTCACTGATCATCTTTTTGGTGCCCTCCAAAGAAAAAGCATTGCTGCATTCAGAGATGATACAACTCTCAACAGAGGTGAATCCATAGCACCTGAGCTCCTTCGCGCAATTGAAGGCTCTAAGATTTTGATTGTGATATTCTCTAAAAACTATGCTTCCTCAACTTGGTGCTTGCAAGAATTAGAAAATATCCTTCAATGTGTTCAACTATCGGAAAAACGTGTTCTGCCTGTTTTCTATGATGTCGGTCCATCTGAGGTGCGATCTCAAAGAGGATGTTATGCTGAAGCCCTTGCCAAACATGAAGAAAATCATGATTTAGAGATGGTGCGAAGATGGAGGGTAGCTCTAACACAAGCGGGCAATCTCTCTGGATGGGATCTACGTAATAAGCCACAATATGCAGAGATTGAAATGATTGTTCAAGAGATAATAAGTACATTTGGTTACAAATTTTCATGCCTTCCAAATGATTTAGTTGGAATGCTTTCTCCTATAGAGGAATTGGAAAAGTGTTTACTTTTGAACTCGACCAATGATGTTCGAGCTGTTGGAATTTGTGGGATGGGTGGAGTAGGGAAGACAACTATTGCTTCTCTTTTATATGGCAGAATCTCTCATCAATTTGATGCATGTTGTCTTATTGATGATGTGAGCAAAAATTTTAAATATTACGGTCCAATTGGTGTACAAAAGCAAATTCTACATCAAACTCTAGGCGAAGAACACAATCAAATATACAATCTTTACAGAGGAACCAACTTGATACAAAGTAGGCTATGTCATCTTAAGGCTCTAATAATTTTGGATAATGTTGATCACAGTGAACAGTTGGAGAAACTAGCTGTGACTCCTAAATTGTTAGCTGCAGGGAGTAGAATCGTTATCGTTTGCAGAGATGCTCATATCTTGAAAGAGTATGGAGTGGACGCACTTTACAAAGTTCAACCCTTGAATGATACAAACTCCCTTCAGTTATTTTGTCGAAAAGCTTTCAAATGTGATAATATTGTGAGTGATACTTATAACGAGTTGACATATGACATATTAAATATTGCTCGTGGCCTACCATTAGCGATCAAAGTGCTAGGTTCATTTTTATTTGATCGAAGTATCTCTGAATGGAGCAGTGCACTGACTAGATTGAGAGAAAGTCCAAATAAAGATATTATGGATGCACTTCAGTTAAGTTTTTATGGGCTAGAGAAAGTGGAATTACAAATATTTCTTGATATTGCTTGTTTTTTTAACGGCAGTGAGGAAAAATTTGTTAAAAATGTTTTGAATTGTTGTGGATTTCATCCTGATATTGGATTAAGAGTTCTTGTTGATAAATCCCTCATAAGCATTTCAGTTGAAAGTAAAATTGAAATGCATAGTATGTTGGAAATGCTAGGAAGAAAAATTGTTCAAGAAAATTCAACGAAAGCGGCAAGAAAGTGGAGTAGGTTGTGGCTCCATAAACATTACTACGATGTTATTTCAGACAATATGGAAAAGAATGTTGAAGCCGTAGTTTTGCAGGGAAATAAAAGCGATACAAAAATATTGATGGCTGAAGCATTGTCAAAAATGAGTCGTCTTAGATTGCTCATACTCAAGGATGTTAAATTTTTAGGAAGCAGCCTCGACAATCTTTCAAATCAATTAAGATATGTTGCGTGGGATGGCTATCCTTTCAAGTATTTGCCATCAAGTTTCCAGCCCAATCAACTTGTTGAATTGATCATGGTGGGTAGCAGCATCGAACAACTGTGGGAAGGAAAGAAGAATCTGCCCAATTTGAAGACTCTGGATCTAAGCTACTCCAAAAATTTAATCCTGATGTCAGATTTTGGAGAGGTTCCAAATCTTGAACGGTTAAACCTTGAAGGATGTGTAAAGCTTGTGCAGTTGGATCAATCTATTGGTCTTGTAAAGAAGCTTGTTTTCTTGAATTTGAAAAATTGCAAAAGTCTTACATGCATACCCGACGACATATCTGATCTCAAGTCTCTTGAATATTTAAACATTTGCAGTTGTTCCGAAGCGTTTAAGAATCCATTGGAGTTGCCTTCCTTGGCTAGCTTATCTTGTTTGCGTGAAGTTTATATTAGTTTTTGCGGTCTAAGCCAACTCACTGATACTATTAGATGTCTAAGTTGTTTGCAAAGATTAAATTTAGGGGGAAACAATTTTGTGACATTACCTAGCCTGAGGAAGCTTTCCAAACTCGTATATTTAAACTTGGAGCACTGCAAGTTGTTAAAGTCTTTGCCTTATTTTCCTTTACCTGCTCCCATCGAGCACGGTGAATATTGGAGTGTGGGAATGTATATTTTCAACTGTCCTGAATTGCGTGAGAGCGAGATGCAACGTTGCAGTGACATAACTTTTTCATGGATGACGCAATTCATTCTAGCAAACCAAGAATCATCTACCTCCTCTCACTGGATTGAAATTGTTATTCCAGGAAGTGAAATACCAAGTTGGTTTAGCGATCAGAATGTGGCTACATCAATAAGCATAAATCCATCCCCCAAAATACATGACAATAATGTCATCGGCATTGTTTGTTGTGTATTATTTTCTGCAGCACCTCATGATGAACCAATAACAGCAAATGAACGAAAAGCCTTATTACATCTAACTTTTCATAGAGGTGACCTCACCGTTCATTATCGCATTCAAGTATATACAAATCTTATTATGGTTAAATCAAATCACATGTGGCTAACCTATTTCACCCAGGAATCTTTCATTGTTATTCTAAACAATATAGGCAATGAAGCCGCCGATCCTATCAGAATGGAAGCTTCCATTGTAGACGGTGAAGATTTGAATGTGGAGGTGAAGAGTTGCGGATATCATTGGATACTTAAAAATTCAACTTAA 2982 0.3716 MASSSSNSFSSVLTTLPNNDYYDVFVSFRGKDTRHSFTDHLFGALQRKSIAAFRDDTTLNRGESIAPELLRAIEGSKILIVIFSKNYASSTWCLQELENILQCVQLSEKRVLPVFYDVGPSEVRSQRGCYAEALAKHEENHDLEMVRRWRVALTQAGNLSGWDLRNKPQYAEIEMIVQEIISTFGYKFSCLPNDLVGMLSPIEELEKCLLLNSTNDVRAVGICGMGGVGKTTIASLLYGRISHQFDACCLIDDVSKNFKYYGPIGVQKQILHQTLGEEHNQIYNLYRGTNLIQSRLCHLKALIILDNVDHSEQLEKLAVTPKLLAAGSRIVIVCRDAHILKEYGVDALYKVQPLNDTNSLQLFCRKAFKCDNIVSDTYNELTYDILNIARGLPLAIKVLGSFLFDRSISEWSSALTRLRESPNKDIMDALQLSFYGLEKVELQIFLDIACFFNGSEEKFVKNVLNCCGFHPDIGLRVLVDKSLISISVESKIEMHSMLEMLGRKIVQENSTKAARKWSRLWLHKHYYDVISDNMEKNVEAVVLQGNKSDTKILMAEALSKMSRLRLLILKDVKFLGSSLDNLSNQLRYVAWDGYPFKYLPSSFQPNQLVELIMVGSSIEQLWEGKKNLPNLKTLDLSYSKNLILMSDFGEVPNLERLNLEGCVKLVQLDQSIGLVKKLVFLNLKNCKSLTCIPDDISDLKSLEYLNICSCSEAFKNPLELPSLASLSCLREVYISFCGLSQLTDTIRCLSCLQRLNLGGNNFVTLPSLRKLSKLVYLNLEHCKLLKSLPYFPLPAPIEHGEYWSVGMYIFNCPELRESEMQRCSDITFSWMTQFILANQESSTSSHWIEIVIPGSEIPSWFSDQNVATSISINPSPKIHDNNVIGIVCCVLFSAAPHDEPITANERKALLHLTFHRGDLTVHYRIQVYTNLIMVKSNHMWLTYFTQESFIVILNNIGNEAADPIRMEASIVDGEDLNVEVKSCGYHWILKNST* 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0601 993 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Mal3g0601 993 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 448 IPR027417 -
Mal3g0601 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 192 712 IPR044974 GO:0006952
Mal3g0601 993 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 192 712 - -
Mal3g0601 993 Gene3D - 353 438 IPR042197 -
Mal3g0601 993 ProSiteProfiles Leucine-rich repeat profile. 751 772 IPR001611 GO:0005515
Mal3g0601 993 Pfam C-JID domain 852 991 IPR045344 -
Mal3g0601 993 Gene3D - 187 347 IPR027417 -
Mal3g0601 993 Gene3D Ribonuclease Inhibitor 487 719 IPR032675 -
Mal3g0601 993 ProSiteProfiles TIR domain profile. 20 184 IPR000157 GO:0007165
Mal3g0601 993 PRINTS Disease resistance protein signature 626 642 - -
Mal3g0601 993 PRINTS Disease resistance protein signature 295 309 - -
Mal3g0601 993 PRINTS Disease resistance protein signature 389 403 - -
Mal3g0601 993 PRINTS Disease resistance protein signature 219 234 - -
Mal3g0601 993 SMART till_3 21 159 IPR000157 GO:0007165
Mal3g0601 993 SUPERFAMILY "Winged helix" DNA-binding domain 425 529 IPR036390 -
Mal3g0601 993 SUPERFAMILY L domain-like 548 790 - -
Mal3g0601 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 734 952 IPR044974 GO:0006952
Mal3g0601 993 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 734 952 - -
Mal3g0601 993 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 162 IPR035897 -
Mal3g0601 993 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Mal3g0601 993 Gene3D - 19 186 IPR035897 -
Mal3g0601 993 Gene3D Ribonuclease Inhibitor 720 873 IPR032675 -
Mal3g0601 993 Pfam TIR domain 22 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0601 Mal-Chr3 22697685 22701207 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0601 22 789 WRKY Transcription Factor Family AT4G12020 30.750 7.20e-86 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0601 - - cam:101502375 1434.85