Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0596 ATGGATTCTCCTATAGAAGAATTAGAAAAGCTTTTACATTTGGAATTGGTTGATGATGTTCGAGTCGTAGGAATTTGTGGGATGGGCGGAATAGGGAAGACAACTCTTGCTACTGTTTTATATGACCGAGTCTCTCATCAATTTGATGCATGTTGTTTTATTGAAAAGTTGAGCAAAATTTATAAACATGAAGGTCCTATCGGTGCACATAAGCAAATTCTACGTCAAACTCTAGGCGAAAAACACCTTCAGGTCTATCTTCATGATGCAACTAATTTGATACTGAGCAGGCTACATCGTGTAAAGGCCCTAATAATTCTTGATAGTGTTGATCAAATTGATCAATTGGATAAAACAGTTGTGGATCGTGAATGGTTAGGTGCAGGGAGTAGAATCATTATAATATCTCGACATGAACATGTCTTGAAAGTGTATGGTGTGGATGATGTTTACAAAGTTCCGATTTTGAACCAGACTAACTCTCTTCAACTATTTTGTCAAATACTTTCCAAACATGATCATAATACTAGTCCTGAACAACTGGCTAATGATGTACTAAATTACGCTAATGGTGTACCACTCGTAATTAAAGTATTGGGCTCATTTTTGTTTGGAAGACGTATCTTCGATTGGAGAAGTGCATTGGCTAGATTTAGAGAAAGTCCGAACTATATCATGGATGTGTTGCTATTAAGTTTTGACGTGCTCGATAAAATGGAAAAAGAAATATTTCTTGACATCGCTTGTTTTTTCAATGGACGTGAGGAGGATTATGTTAAAAATATTCTAAATTGTTGTGGATTTTATGCTGATACTCAATTAATTGTTCTCATTGATAAATCACTCATAAGCATTTCAGATGATAGTAAGATTGAAATGCATGCTTTGTTGGAAGAGTTAGGCAGAAAAATTGTTCACGAACATTCAAGCAAAACGTCAACAAAGTGGAGCAGATTGTGGTTGCACAAACAATTCTGCAATGTTGTGTTGGAGGAGATGGAAAACAACGTTGAAGCTATAGTTTTGGATGGAATCGAAAGCGATAAAAAAATATTGAGGGCTGAAGCATTGTCAAATATGAGTCGTCTTAGATTGCTCATACTCAAGGATGTTAAATTTTTAGGAAGCAGCCTCGACAATCTTTCTAATGAACTAAAATATGTTGCATGGAACAGATATCCTTTCATGTATTTGCCATCAAATTTTCAGCCTGATCAACTTGTTGAATTGATCTTGGTGGATAGCAGCATCAAACAACTATGGGAAGGCAATAAGAATCTACCGAATTTGAAGACTCTGAATCTAAGTTACTCTGAAAATCTAATCAAGATGCCATATTTTGGAGAATTTCCAAATCTTGAACATCTAAATCTTGAAGGATGTCTAAAACTTGTGCAGATGGATCCATCTATTGGTCTTCTAAGAAAGCTTGTTTTCTTAAATTTGAAGAATTGCAAAAGTCTTATATGCATACCCAAGGAAATATCTTGTGTCCTGTCTCTTAAATATTTAAATCTTTCCGGTTGTTCCAAAGCGTTTAAAAATCGCATTGCACGTGAAGATTTTTCTGGTTGTTTGTTGCCTTTCTTGCCTAGTTTCACTTGTTTGAGTGAACTTGATATTAGTTTTTGCAGTCTAAGCAAAATACCTGATGCTCTTGGATGTCTACCTTGCATGGAAAGATTAAATTTAAGGGGAAATAATTTTGTTACATTGCCTAATCTTCGCGAGCTTTCCAAACTTGAATATTTGAATTTGGAGCATTGCAAGCAGTTGAAATCTTTGAATGAGCTCCCTTCGCCTTTTTCTATCAAGCGGGATAAATATAAAAAAGCAGGAATGTATTTTTACTTAACAATGATGGGTTATGGAAACTCATAA 1881 0.3514 MDSPIEELEKLLHLELVDDVRVVGICGMGGIGKTTLATVLYDRVSHQFDACCFIEKLSKIYKHEGPIGAHKQILRQTLGEKHLQVYLHDATNLILSRLHRVKALIILDSVDQIDQLDKTVVDREWLGAGSRIIIISRHEHVLKVYGVDDVYKVPILNQTNSLQLFCQILSKHDHNTSPEQLANDVLNYANGVPLVIKVLGSFLFGRRIFDWRSALARFRESPNYIMDVLLLSFDVLDKMEKEIFLDIACFFNGREEDYVKNILNCCGFYADTQLIVLIDKSLISISDDSKIEMHALLEELGRKIVHEHSSKTSTKWSRLWLHKQFCNVVLEEMENNVEAIVLDGIESDKKILRAEALSNMSRLRLLILKDVKFLGSSLDNLSNELKYVAWNRYPFMYLPSNFQPDQLVELILVDSSIKQLWEGNKNLPNLKTLNLSYSENLIKMPYFGEFPNLEHLNLEGCLKLVQMDPSIGLLRKLVFLNLKNCKSLICIPKEISCVLSLKYLNLSGCSKAFKNRIAREDFSGCLLPFLPSFTCLSELDISFCSLSKIPDALGCLPCMERLNLRGNNFVTLPNLRELSKLEYLNLEHCKQLKSLNELPSPFSIKRDKYKKAGMYFYLTMMGYGNS* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0596 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 512 IPR044974 GO:0006952
Mal3g0596 626 SUPERFAMILY "Winged helix" DNA-binding domain 225 328 IPR036390 -
Mal3g0596 626 SUPERFAMILY L domain-like 348 597 - -
Mal3g0596 626 PRINTS Disease resistance protein signature 97 111 - -
Mal3g0596 626 PRINTS Disease resistance protein signature 22 37 - -
Mal3g0596 626 PRINTS Disease resistance protein signature 189 203 - -
Mal3g0596 626 PRINTS Disease resistance protein signature 425 441 - -
Mal3g0596 626 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 533 601 - -
Mal3g0596 626 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 533 601 IPR044974 GO:0006952
Mal3g0596 626 Pfam NB-ARC domain 17 219 IPR002182 GO:0043531
Mal3g0596 626 Gene3D - 155 237 IPR042197 -
Mal3g0596 626 Gene3D Ribonuclease Inhibitor 336 516 IPR032675 -
Mal3g0596 626 Gene3D Ribonuclease Inhibitor 517 606 IPR032675 -
Mal3g0596 626 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 512 - -
Mal3g0596 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 247 IPR027417 -
Mal3g0596 626 Gene3D - 1 148 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0596 Mal-Chr3 22608711 22610816 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0596 7 599 WRKY Transcription Factor Family AT5G45050 32.967 1.48e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0596 - - cam:101502375 759.214