Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0595 ATGGCGCTTCCTCCACAACCCGAATCCAACAATGGAGGAATTGTCGCTACCGAAGAAAACGATGGAACTCCCATTCGTTACCTTCCTCTCGATCATCTCTACTCCGCTACATCACCTTGTAGCGGTTCTTCCAATGTCATGTCGAAGAAAGTTAAAGCTCGAAAACTCACCCTCAACAACAATAGTGAGAACGAGATTGAGTTCAGTAATGGTGAAATCGATGATTCACCGATTGAGAATGATGAAAAAACGATATTGAAAACTACGTCGTTTTCTGTGGTGGATTATCCTAATCCGCCGCTTTTGTTTGTTTACTCGCGCCGGAGACGGAAGAGGAGTTCAATTGCGGCGAATTGTGGTGATGATTCTGAGAGGACAGTGTTGAAGAGGAGGAGAATTGGTAGTAATGAGTTGGAGAGATTAGGGATTGATTTGAATTTGATAGGGAAAATTGATGATGGACCTGGATTGAGGAAATGTCGAAATCAAATTGGGAATTTTTCTGAGAATTGTGATTCTGCTGCTAAGGCTTCAAAGTTGATGCCTGATTCTTACACATTGAAGAGATGGGTCACGTTGAGTTTTGATGATACCAATCCTGAGGCTTTTGTCGGATTGAGATGCAAGGTTTACTGGCCCATGGATTTAAAATCATACACTGGCTCTGTCAAAAGTTACGACAGGGAAGCTAAGATACATCATATCGAGTATGATGATGGAGACGAGGAAAATTTAATTCTTTCAAATGAAAATGTAAAATATCATGTTTCCCGCAACGACATGGAACGTTTAAAATTGAGTTACGCCAAAGTTCATGACAATAATGTCTCTGATTGTAATGTTGAAGAGATGCTCGCACTGGCTGCAAGTATGAATGATTGTCAAGACTTTGAGCCTGGGGATATCGTTTGGGCCAAGCTTACAGGTTATGCAATGTGGCCAGCTGTTGTTCTGGATGAATCACTTGCTAGCAGCTGTAAGGGTTTAAAAACGTTCATAGGGGGGAGATCAGTTCCTGTCCAATTTTTTGGCACTCATGACTTCGCAAGAGTTCGAGTGCAACAGGTGAAATCATTTCTTAGTGGACTTCTAACAGATCTACACTCAAAGTGCAAGAAACCGAGTTTCATTGAAGGTTTAGAAGAGGCAAAAAGGTATTTAAGCGCACAGAAGCTTCCTTTGGAGATGATAGAATTGAGGAAAAGATGTATAGCTGATGACCGTAACAATGTAAGTGGAGAGGATGGAGGATGTACAGATTCGGGTGAAGACTATGTAAGTGACAAAGGGACTTGGGCAGCACTTCCTTATGAAGTGGGAGACTTGCAAATTCTAAGCCTTGGAAAGATAGTTGGAGATTCTACAGCTTTTCGAGATGGAACATCCATCTGGCCTGAAGGGTACACAGCAGTGAGGAAGTTCACTTCAGTTACTGACCCTAAAGTATCTGTCCCTTATAAGATGGAGGTTTTGAGAGATCCAGAATCCAGATTCAGACCACTATTTAGAGTGACAATTGATGGTGGTGAGCAGTTCAATGGTTATAAACCATCTACTTGCTGGAATCAAGTATACGAAAGGATAAAGAAATTGAAAAAGGCTGTTTCTGAAGGTTCTGTTGTTGACGGTGAGGTAGAAAGTGGCTATGAATCCGGCTCTGATATGTTTGGTTTCTCCAATCCTGAAGTGGCTAAACTTATAAAGGGATTATCTAAATCCAAAGTCTCTTTGAAGAAATCAATTTGCAAGTCAGGTTCCAGATTGCCTCTTGGTTATAGACAGGTTCACATTAATTGGTTTGATCTCGATAAGTGCAATGTGTGCCATATGGATGAGGAGTACGAGAACAATCTCTTTCTGCAGTGTGACAAATGCAGAATGATGGTCCATGCTAGATGCTATGGAGAACATGAACCTGTTAATGGAGTGCTATGGTTATGCAACTTATGTCGCTCGGGTGCTCCTCCCCCACCTTGTTGCTTATGTCCACTCATAGGTGGTGCAATGAAGCCTACAACGGATGGCCGATGGGCTCATTTGGCTTGTGCGATGTGGATACCTGAAACTTGCTTAGCTGATGTCAAGAGAATGGAGCCTATTGATGGTTTGAGTAGAATCAGTAAGGACCGTTGGAAGTTGTTATGCAGCATATGTGGTGTATCTTATGGTGCTTGCATCCAATGTTCAAACAGTTCTTGTCGAGTAGCATATCATCCACTCTGTGCACGTGCAGCTGGTCTTTGTGTTGAGCTTGAGAATGAGGACAGGCTCTATCTACTTTCCGTAGATGATGATGAGGATCAGTGCATTCGCTTACTTTCTTTCTGCAAGAAACATAGGCAGCCATCTCATGAACATTCTGTTGCTGATGAACGTGTCCAGGTTATTGGTCAATGTTCAGACTATGAACCACCACCCAATCCATCTGGGTGTGCCCGAAGTGAACCATATGATTACTTTGGTAGGAGAGGCCGAAAAGAACCTGAAGCACTTGCAGCTTCATCGCTGAAACGTTTATTTGTGGAGAATCAACCTTACTTAGTTGGTGGATACTGCCAACATGGATTATTGAACGACCTAGAGCCTTCTGGCAGAGGAGTCTGCTCTAAATTCTTTTGTAGCGAACAAAGGCTGAGAATCTCTATGGTTGATGCTGCAGACAGCATACTTACTGTTGCCGAGAAATATAAGTACATGAGGGAAACCTTTCGGAAACAGTTAGCATTTGGGAAATCAAGAATTCATGGATTTGGTATCTTTGCAAAACATCCATATAAAGGTGGAGACATGGTGATTGAATACACTGGTGAACTTGTTAGACCTCCTATAGCTGACCGGAGAGAGCGTTTTATATACAATTCTTTGGTGGGTGCTGGAACATATATGTTTCGGATTGATGATCAACGAGTCATTGATGCCACTAGAGCAGGAAGCATTGCTCATTTAATTAATCATTCCTGTGCGCCAAATTGCTATTCAAGAGTCATTAGTGTTAACGGTGACGAGCATATTATAATATTTGCAAAGAGGGACATTAAACAATGGGAAGAGCTTACATATGATTATAGATTTTTCTCAATAGATGAGCGGCTTTCTTGTTACTGTGGCTTCCCAAAATGTCGAGGTATAGTAAATGATACTGAGGCAGAAGAGCGAGCTGCTACCTTTTATGCACCACGAAGTGAATTAGTAGATTGGAAAGGAGAATGA 3210 0.4193 MALPPQPESNNGGIVATEENDGTPIRYLPLDHLYSATSPCSGSSNVMSKKVKARKLTLNNNSENEIEFSNGEIDDSPIENDEKTILKTTSFSVVDYPNPPLLFVYSRRRRKRSSIAANCGDDSERTVLKRRRIGSNELERLGIDLNLIGKIDDGPGLRKCRNQIGNFSENCDSAAKASKLMPDSYTLKRWVTLSFDDTNPEAFVGLRCKVYWPMDLKSYTGSVKSYDREAKIHHIEYDDGDEENLILSNENVKYHVSRNDMERLKLSYAKVHDNNVSDCNVEEMLALAASMNDCQDFEPGDIVWAKLTGYAMWPAVVLDESLASSCKGLKTFIGGRSVPVQFFGTHDFARVRVQQVKSFLSGLLTDLHSKCKKPSFIEGLEEAKRYLSAQKLPLEMIELRKRCIADDRNNVSGEDGGCTDSGEDYVSDKGTWAALPYEVGDLQILSLGKIVGDSTAFRDGTSIWPEGYTAVRKFTSVTDPKVSVPYKMEVLRDPESRFRPLFRVTIDGGEQFNGYKPSTCWNQVYERIKKLKKAVSEGSVVDGEVESGYESGSDMFGFSNPEVAKLIKGLSKSKVSLKKSICKSGSRLPLGYRQVHINWFDLDKCNVCHMDEEYENNLFLQCDKCRMMVHARCYGEHEPVNGVLWLCNLCRSGAPPPPCCLCPLIGGAMKPTTDGRWAHLACAMWIPETCLADVKRMEPIDGLSRISKDRWKLLCSICGVSYGACIQCSNSSCRVAYHPLCARAAGLCVELENEDRLYLLSVDDDEDQCIRLLSFCKKHRQPSHEHSVADERVQVIGQCSDYEPPPNPSGCARSEPYDYFGRRGRKEPEALAASSLKRLFVENQPYLVGGYCQHGLLNDLEPSGRGVCSKFFCSEQRLRISMVDAADSILTVAEKYKYMRETFRKQLAFGKSRIHGFGIFAKHPYKGGDMVIEYTGELVRPPIADRRERFIYNSLVGAGTYMFRIDDQRVIDATRAGSIAHLINHSCAPNCYSRVISVNGDEHIIIFAKRDIKQWEELTYDYRFFSIDERLSCYCGFPKCRGIVNDTEAEERAATFYAPRSELVDWKGE* 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0595 1069 PANTHER PHD FINGER PROTEINS 22 1066 - -
Mal3g0595 1069 Pfam PHD-zinc-finger like domain 658 779 - -
Mal3g0595 1069 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATX2 22 1066 - -
Mal3g0595 1069 Pfam F/Y-rich N-terminus 440 490 IPR003888 GO:0005634
Mal3g0595 1069 ProSiteProfiles Extended PHD (ePHD) domain profile. 656 780 IPR034732 -
Mal3g0595 1069 Gene3D SET domain 872 1057 IPR046341 -
Mal3g0595 1069 ProSiteProfiles FYR domain FYRC motif profile. 497 583 IPR003889 GO:0005634
Mal3g0595 1069 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 596 650 IPR013083 -
Mal3g0595 1069 CDD ePHD_ATX1_2_like 665 779 IPR041956 -
Mal3g0595 1069 CDD PHD_ATX1_2_like 604 650 IPR042010 -
Mal3g0595 1069 SMART set_7 905 1029 IPR001214 GO:0005515
Mal3g0595 1069 CDD SET_SETD1-like 892 1041 - -
Mal3g0595 1069 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 651 782 IPR013083 -
Mal3g0595 1069 ProSiteProfiles SET domain profile. 905 1023 IPR001214 GO:0005515
Mal3g0595 1069 SUPERFAMILY FYVE/PHD zinc finger 596 666 IPR011011 -
Mal3g0595 1069 Gene3D - 435 575 - -
Mal3g0595 1069 Pfam PHD-finger 617 651 - -
Mal3g0595 1069 Pfam F/Y rich C-terminus 499 572 IPR003889 GO:0005634
Mal3g0595 1069 ProSiteProfiles PWWP domain profile. 299 362 IPR000313 -
Mal3g0595 1069 SMART fyrc_3 501 585 IPR003889 GO:0005634
Mal3g0595 1069 SMART fyrn_3 449 493 IPR003888 GO:0005634
Mal3g0595 1069 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g0595 1069 ProSiteProfiles Post-SET domain profile. 1029 1045 IPR003616 -
Mal3g0595 1069 ProSitePatterns Zinc finger PHD-type signature. 605 650 IPR019786 -
Mal3g0595 1069 SUPERFAMILY Tudor/PWWP/MBT 292 394 - -
Mal3g0595 1069 ProSiteProfiles Zinc finger PHD-type profile. 602 653 IPR019787 -
Mal3g0595 1069 SMART PHD_3 714 780 IPR001965 -
Mal3g0595 1069 SMART PHD_3 604 651 IPR001965 -
Mal3g0595 1069 Pfam SET domain 916 1022 IPR001214 GO:0005515
Mal3g0595 1069 SMART PWWP_4 297 360 IPR000313 -
Mal3g0595 1069 Pfam PWWP domain 300 387 IPR000313 -
Mal3g0595 1069 Gene3D - 287 396 - -
Mal3g0595 1069 ProSiteProfiles FYR domain FYRN motif profile. 434 493 IPR003888 GO:0005634
Mal3g0595 1069 Gene3D - 197 249 - -
Mal3g0595 1069 SUPERFAMILY SET domain 902 1042 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0595 Mal-Chr3 22555162 22565313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0595 585 750 C2H2 Transcription Factor Family AT3G14740 38.728 5.70e-27 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mal3g0595 zf-HC5HC2H_2 3.8e-33 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0595 - - gmx:100808923 1713.35