Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0591 ATGCTTGCCAAGGGTTTTCATCTTGGTGGGGCTCTGATACCGCGAAAGAGACATTTTGATGAGTTAAGCTATCTCAGCTACGGACAACCACGTCAAAATCAAAGAGCTCTAATTGATGCCTATGGTAGTAACAAAAGCCAAGAAACTTCTGGCAGTAAGCCTTTGTTAGTGGAGCGACCGGATAACAATGGTATGGATAAGGTTAGGACAACATCATGGAAGAATACTGAAGAAGAGGAGTTCGATTGGAAAGATATGCGTCCGACACCAAAAAAGCCTGTTACTGTTGCAGCAAGTCCAACTATTGAGTACCGTACACCAGTTTTGCCGGCAACTTTTGAGACGAGGCACTCCATAAATGTGCATGCTCCACGTCCTCACACCACAACTCCTATATTTCCATCGAAGAGTCCTGTTAGGAATCCATTCGAATCAATAAATGCTAACAGTACCATTGTGAGTCATGGTCCAATAAATAGACCTTTTCCTGTGTATGAACATGGTGTTGAGAACAATGATATCAGTAAAAGAAACCTGCATCAGTTGCCTAATCAGCTACCCGGTCTGATTTCATCTAACACGCATAACAGTGGACAAACACCGCCATTCCAGTTTTTTCCATCTCAGGATCCAGCAGCGTTGCAATTCACTTATAGGACCTCTTTGCCAGGACATGGTGCTGCTATGATTAACCCCCCGCCAAATGCACGACCTGTTATGCCACTTCCTTTGCCAGGCCAAAGAATCGGAAACAACCCTTTTCATTTCCAGGGGGGAGTTTTTCGACCTTTACCTCCAGCAGGCCCACATGCTCAACCCCAGATTCTACCTCTTCCCAATCCTGGTCCTTTTGTGTCAAGCCAACAGCCAACTATTGGATATTCTAATTTGATTAGTTCACTCTTTGGCCAAGGTGTAATCTCATTGGCTAATCAAGCCCCTGCGCAGGATTTTATTGGCATTGAGTTTGATCCAAATATTCTGAAGGTTCGTCATGAATCTGTTATCAGTGCCTTATATGGTGATCTTCCTAGACAGTGCACAACTTGTGGCCTCCGATTCAAATCCCAAGATGAGCACAGCAGTCACATGGATTGGCATGTGACTAAGAACCGTATGTCTAAAAACCGTAAGCAAAAGCCCTCTCGCAAGTGGTTTGTGAGTGAGACGATGTGGCTTAAATGTGCAGAGGCATTGGGAGTTAAATCAGCTCCAGGTTTTTTGACAACCGAGACCACTGAGGAAAATAAAGACGATGAAGAGGTTGCAGTTCCGGCTGACGAGGACCAAACTACATGTGCATTATGTGGAGAACATTTTGACGAGTTTTACAGCGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTATACTTTAATAAGCAGTTAGGCCCCATTGTTCATTATAAATGTAAATCTTAA 1422 0.4402 MLAKGFHLGGALIPRKRHFDELSYLSYGQPRQNQRALIDAYGSNKSQETSGSKPLLVERPDNNGMDKVRTTSWKNTEEEEFDWKDMRPTPKKPVTVAASPTIEYRTPVLPATFETRHSINVHAPRPHTTTPIFPSKSPVRNPFESINANSTIVSHGPINRPFPVYEHGVENNDISKRNLHQLPNQLPGLISSNTHNSGQTPPFQFFPSQDPAALQFTYRTSLPGHGAAMINPPPNARPVMPLPLPGQRIGNNPFHFQGGVFRPLPPAGPHAQPQILPLPNPGPFVSSQQPTIGYSNLISSLFGQGVISLANQAPAQDFIGIEFDPNILKVRHESVISALYGDLPRQCTTCGLRFKSQDEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWLKCAEALGVKSAPGFLTTETTEENKDDEEVAVPADEDQTTCALCGEHFDEFYSDETEEWMYRGAVYFNKQLGPIVHYKCKS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0591 473 MobiDBLite consensus disorder prediction 60 89 - -
Mal3g0591 473 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 6 473 - -
Mal3g0591 473 MobiDBLite consensus disorder prediction 42 95 - -
Mal3g0591 473 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 6 473 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Mal3g0591 473 ProSitePatterns Zinc finger C2H2 type domain signature. 347 367 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0591 Mal-Chr3 22351813 22353331 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0591 25 89 C2H2 Transcription Factor Family AT4G04885 49.231 6.49e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal3g0591 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0591 K14400 - gmx:100794796 480.715