Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0584 ATGGTTTCTGCTCTCTCTCAAGTCATTGGAACATCTACCAATAATAATAACCCACACATGGCACAATCAACCTCAACTACTATGGTCAATGAAGAATCTCAACCACCTCAACCTCTTCTTGTTCAAGAGACCAAAAACAAACCACACTATAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCTGAAATTCGTGACCCAAAAAAAGCAGCTAGGGTTTGGTTAGGAACATTTGATACAGCTGAAGATGCAGCTCTTGCATATGACAAAGCAGCACTCAAATTCAAAGGCACAAAAGCTAAACTTAATTTCCCTGAAAGAGTTGTTCAATGCAACACTTCTAGTGCAATTCAACAAAGTGGTTCTGTTTCTAATTCTGTTGATCAACAAGTTTTTCCAAACTTGTTTCAATATGCTCAGATTCTTTCTAGTGATGTTGAATTCCCTTATTATGCATCTCATCTTTTCAATCAACAACAACATCAAGGAGATAGTCACCCACCAGGCCAGTAG 516 0.3934 MVSALSQVIGTSTNNNNPHMAQSTSTTMVNEESQPPQPLLVQETKNKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEDAALAYDKAALKFKGTKAKLNFPERVVQCNTSSAIQQSGSVSNSVDQQVFPNLFQYAQILSSDVEFPYYASHLFNQQQHQGDSHPPGQ* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0584 171 SUPERFAMILY DNA-binding domain 49 107 IPR016177 GO:0003677
Mal3g0584 171 ProSiteProfiles AP2/ERF domain profile. 49 106 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 Pfam AP2 domain 48 98 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 MobiDBLite consensus disorder prediction 1 36 - -
Mal3g0584 171 CDD AP2 48 107 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 PANTHER DNA-BINDING DOMAIN 14 162 IPR044808 GO:0003700|GO:0009873
Mal3g0584 171 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 14 162 - -
Mal3g0584 171 SMART rav1_2 49 112 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 PRINTS Ethylene responsive element binding protein signature 72 88 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 PRINTS Ethylene responsive element binding protein signature 50 61 IPR001471 GO:0003700|GO:0006355
Mal3g0584 171 Gene3D AP2/ERF domain 49 108 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0584 Mal-Chr3 22135558 22137859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0584 1 157 AP2-EREBP Transcription Factor Family AT5G13330 50.847 8.08e-47 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g0584 AP2 5.6e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0584 - - mtr:MTR_7g020980 293.508