Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0578 ATGGGATTGATTTGTGGTTGTGGTTTTGTTTTTTGTGTTTTGATGTTTAAGAAAAGACACACTCCTTTTTCACTTGCAAATAAATTGTTGGTATTTCAGCCACTTTTTCTTCTTTTGTTCTTGTTTAGTTTGCATCATGACACTGTGCAATGCCAAGGAAGGTTGAGTAAGCACTTATCTTCTGAGCCTTCTGCCTCATCAGAGTATAAGGATGATCCTAGGAAGATTATTGTTAGCACAGTTTTAGGAGCTGTAACTGGATTAATTGGTTCTGTACTCTTTGCATTCGTGATTCGTTGTGTTGTTCGGTATCTAAACCGAACACCAATCCTCAAAGGACCTGTCATCTTCTCTCCGAAAATTGCATCAAAGACACTCCAAGTAGCTTTGACAAAAGAAAACCATTTGCTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGAGAATGGTCTCATAATCGCAGTTAAGAGGCTAATACCCTTTGAGAGCAATTCACCGGAGTGTAGGAAAAAGTCGGTGAAGAGGCAAATACAAATGGAGCTAGAGCTTCTTGCTAGCTTAAGACATAGGAATTTGATGAGTTTAAGGGCTTATGTTCGCGAAAACGATGGATTCTCGTTGGTTTATGATTATGTATCGACCGGTAGTCTTGCAGATGTGATGAATAGAGTGAGGGAAAATGAGTTGCAGATTGGTTGGGAAGCTAGGTTAAGGATTGCTGTTGGTGTGGTGAAAGGTCTTCAATATCTTCATTTTACTTGTGTGCCTCAGATTTTGCATTTCAATTTGAAGCCTACAAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCAGATTATGGATTGGCTAAACTTCTACCAAACTTAGATAGAGGGATTTCTCTCAACACCCCTCCTGAATGTCTCCATAATTGCAGCAGGTACACAGAAAAAAGTGATATATTCAGTTTTGGAATGATACTAGGCGTTTTATTAACTGGTAAGGATCCTACAGATCCTTTCTTTGGAGAAGCGGGCAGAGGAGGAAGTTTGGGATGTTGGCTACGGCACTTGAAGCAAGCCGGCGAGGAACGAGAAGCTCTAGATAAGAGTATTCTAGGGGAACAAGGTGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCTGCATGTTTATCTGATATGCCTGCAGACAGACCTTCTAGTGATGAGCTTGTTCACATGCTAACACAACTCAATAGTTTTTGA 1242 0.4034 MGLICGCGFVFCVLMFKKRHTPFSLANKLLVFQPLFLLLFLFSLHHDTVQCQGRLSKHLSSEPSASSEYKDDPRKIIVSTVLGAVTGLIGSVLFAFVIRCVVRYLNRTPILKGPVIFSPKIASKTLQVALTKENHLLGSSPNGKYYKTVLENGLIIAVKRLIPFESNSPECRKKSVKRQIQMELELLASLRHRNLMSLRAYVRENDGFSLVYDYVSTGSLADVMNRVRENELQIGWEARLRIAVGVVKGLQYLHFTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGISLNTPPECLHNCSRYTEKSDIFSFGMILGVLLTGKDPTDPFFGEAGRGGSLGCWLRHLKQAGEEREALDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0578 413 SUPERFAMILY Protein kinase-like (PK-like) 134 408 IPR011009 -
Mal3g0578 413 Pfam Protein kinase domain 133 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0578 413 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 32 413 - -
Mal3g0578 413 Gene3D Phosphorylase Kinase; domain 1 118 214 - -
Mal3g0578 413 Gene3D Transferase(Phosphotransferase) domain 1 215 412 - -
Mal3g0578 413 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0578 413 PANTHER - 32 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0578 Mal-Chr3 21994363 21996385 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0578 77 410 Receptor kinase-like Gene Family AT2G31880 35.211 8.49e-60 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Mal3g0578 Pkinase 9.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0578 - - gmx:102664273 666.766