Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0551 ATGGCTTCAATCACTCTTTCTCCAAATGGTTCTCCTATTGCATTGCCTCCATCATCTGGTGCTGCTGTTTTACCACCACCACCTAATACTTCTTCTCCATCCAATCAAACATCTAATTCCCCACCTCCTTCAGTTCTTCCTCCGTCCACGACGGTGCCTGTAACTCCTCCTCCTTTACCATCTCTTTCTCCTCCTCCACCTTCGACTACACCACCGCCAACTTCTCCACCTCCATCACCACCTCCAGCAGTTGTAGTATCACCACCTCCACCAGTTGTAACATCACCGCCTCCACCAGTTGCAACGTCACCACCTCCTACACCAGCTGCCAGTGCCCCTCCTCCAGCTGAAACTTCACCTACCATTCCAAATTTGTCTCCACCACCTCCATCAGCAGGTTCCCCTCCTCCTCAACCATCAAAGCCACCTCCTTCTGAATCAGTTTCGCCGTCTCCTCCTCCTCCTCCTCCGGCTAATGTACCTAAGCCACCATCTGCCAAACCTCCTCCTCCTGCACCACAAGCAAAGCCACCAAAAAGTAACACTCCTTCACCTCCTTCACATGATGCACCCCCTCCATCAGTTTCTAAAACCCCTCCTTCCCCTTCTACTGATGTTCCACCTCCATCCACTTCTACTGTTGTTCCACCTCCATCTACATTGCCATCAACTCCTCCTCCTTCAGTCACTTCACAATCTGCACCACCTCCAGCAGCTTCTTTGCCTCGTCCTCCTAGGAATGAAACAGTTGCTGCTGGTGGTCCAACTGTGTCATTGCCATCTATTCCAACTGAGAAACCAACTGCTAGACCAACTGTTGATGGCTCTGGTAATGCTGCCACAAGCAACACCCCTTCACATTCAGGAGGGTTAGATACCGGAGTGGCTGCTGTTATTGGTGTCGTAGTTAGTTTACTTGTCCTCACCCTTCTTGTTTTGGCTGTGTTTTTTGTAAGGAAGAAAAAGAAGGGAAAAGGACCGATAGCTGATGCTGCACCTTCCCCATTTACCTCGTCTCACAATTCAGGTACCTTGTTCTTGAAGCCACAGTCTCCAGCTAATTTTATAGGGAGTGGCAATGCTAGTGAATTTGTGTATTCACCATCAGAGCCAGGTGGTGTAAATAGTTCAAGATCATGGTTCACATATGAAGAACTTATCCAAGCTACAAACGGATTTTCAGAACGGAATATGTTGGGAGAAGGTGGATTTGGGTGTGTCTACAAAGGTTTGCTCGTAGATGGAAGAGAAGTAGCCGTGAAACAGCTTAAAATTGGTGGTGGACAAGGGGAACGTGAATTCAGAGCAGAAGTTGAGACTATTAGTCGAGTACATCATCGTCACCTGGTTTCCTTGGTTGGTTACTGTATATCCGAACATCAAAGATTGCTCGTCTACGACTATGTTCCCAACAATACTCTTCATTACCATCTACATGATGAAAAAGCACCTGTTATGAATTGGTCTATCAGAGTTAAGGTTGCCGCTGGTGCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCATCGAGATATTAAGTCATCAAACATCCTTCTCGATCAAAACTTTGAAGCTCTTGTTTCAGATTTTGGGCTTGCGAAATTAACTTTGGATTCAAACACACACGTCACTACACGTGTAATGGGAACCTTTGGGTACATGGCACCAGAATATGCGACAAGTGGGAAATTGACTGATAAATCTGATGTATATTCCTTTGGTGTTGTCCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCAATTGGTGATGAGAGCTTGGTTGAATGGGCTCGGCCTCTGTTGATCGAAGCACTCAATAACGAGGACTTCGAAACTTTGGCGGATCCAAGACTAGGAAAGAACTACAATAGAAACGAAATGTTTAGGATGATTGAAGCTGCCGCAGCCTGCGTGCGTCACTCCTCAGTTAAAAGGCCAAGGATGAGTCAGGTTGTGAGAGCTTTCGATTCCATGGACGAGTTTTCAGATCTGAATAACGGAATGAAACCGGGGCAGAGTTCAGTGTTTGATTCTGCAGAGCAATCTGCACAGATCAGAATGTTTAGGAGGATGGCTTTTGGAAGCCAAGATAGTTCCGCTTCCAGTTTCTTAAATGAGTCTCAAAGTAGCTATAGGACTAGGGACCAAGACTCTACGACTATATTCCCCCAAAATAAATCTAGGTCTTGGAACTTTCGAGATGACGCATAA 2244 0.4639 MASITLSPNGSPIALPPSSGAAVLPPPPNTSSPSNQTSNSPPPSVLPPSTTVPVTPPPLPSLSPPPPSTTPPPTSPPPSPPPAVVVSPPPPVVTSPPPPVATSPPPTPAASAPPPAETSPTIPNLSPPPPSAGSPPPQPSKPPPSESVSPSPPPPPPANVPKPPSAKPPPPAPQAKPPKSNTPSPPSHDAPPPSVSKTPPSPSTDVPPPSTSTVVPPPSTLPSTPPPSVTSQSAPPPAASLPRPPRNETVAAGGPTVSLPSIPTEKPTARPTVDGSGNAATSNTPSHSGGLDTGVAAVIGVVVSLLVLTLLVLAVFFVRKKKKGKGPIADAAPSPFTSSHNSGTLFLKPQSPANFIGSGNASEFVYSPSEPGGVNSSRSWFTYEELIQATNGFSERNMLGEGGFGCVYKGLLVDGREVAVKQLKIGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHDEKAPVMNWSIRVKVAAGAARGIAYLHEDCHPRIIHRDIKSSNILLDQNFEALVSDFGLAKLTLDSNTHVTTRVMGTFGYMAPEYATSGKLTDKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLIEALNNEDFETLADPRLGKNYNRNEMFRMIEAAAACVRHSSVKRPRMSQVVRAFDSMDEFSDLNNGMKPGQSSVFDSAEQSAQIRMFRRMAFGSQDSSASSFLNESQSSYRTRDQDSTTIFPQNKSRSWNFRDDA* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0551 747 PRINTS Proline rich extensin signature 84 100 - -
Mal3g0551 747 PRINTS Proline rich extensin signature 60 81 - -
Mal3g0551 747 PRINTS Proline rich extensin signature 25 41 - -
Mal3g0551 747 PRINTS Proline rich extensin signature 45 57 - -
Mal3g0551 747 MobiDBLite consensus disorder prediction 709 740 - -
Mal3g0551 747 MobiDBLite consensus disorder prediction 274 289 - -
Mal3g0551 747 CDD STKc_IRAK 399 664 - -
Mal3g0551 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Mal3g0551 747 MobiDBLite consensus disorder prediction 709 747 - -
Mal3g0551 747 SUPERFAMILY Protein kinase-like (PK-like) 372 665 IPR011009 -
Mal3g0551 747 ProSiteProfiles Protein kinase domain profile. 393 673 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0551 747 ProSitePatterns Protein kinases ATP-binding region signature. 399 421 IPR017441 GO:0005524
Mal3g0551 747 Pfam Protein tyrosine and serine/threonine kinase 396 665 IPR001245 GO:0004672|GO:0006468
Mal3g0551 747 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK8 118 716 - -
Mal3g0551 747 MobiDBLite consensus disorder prediction 1 289 - -
Mal3g0551 747 Gene3D Phosphorylase Kinase; domain 1 368 468 - -
Mal3g0551 747 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 118 716 - -
Mal3g0551 747 Gene3D Transferase(Phosphotransferase) domain 1 469 685 - -
Mal3g0551 747 SMART serkin_6 393 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0551 747 MobiDBLite consensus disorder prediction 40 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0551 Mal-Chr3 21185410 21190201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0551 197 727 Trihelix Transcription Factor Family AT5G38560 59.740 0.0 617
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mal3g0551 PK_Tyr_Ser-Thr 4.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0551 - - gmx:100784873 820.461