Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0541 ATGGGCAGAGGAAAACACGAACACTGCTGGAAACACGTTACACAAGTAGAAAATGATCGTAAATGGATATGCAAGTATTGTAATCGTAAGTTTAGTGGAGGAGCTTCAAGAATTGAAGCACACCTGGGGTTGGATGGCAAAGGAGGGGGCATTAGGCGATGCTCCAATTATCCTGTGGTTGTGGCTGGTAATGAAGGAGTTCACAACAATATTATGGTATCCACTTCAAGTAATTCACTAGAAGTTGATCTAGAAGCTCTGGTTAATAGAATTCATTCAACACAAGATCAAGTGGCTAAAGGTGTTCCAGAAGTGATTGGCACTCATATCAGAAGCTCAGTTAACCATCAAAATAATGTCGAAATCATGAATTTATCTCAAGGTTATCATGATGGCACAACTACCAGCTTCTCCATGCAATCATCACAGAATACTAATCTTAATTCTGCTATCCAATTTGCTGATAACACAATTTCACTGCAAAGCAAGCTGATGAGTGTTCCCCACCAAGCTCAACTTCAAAGAAATGAAAATGGGATGATGCTTGGTATGCCTCAAACAGCCACACAGGGGTTCCATACTGCCAGCATTTCGAATTCTACTTACAGAGGAGTTGAAGACTTCTTCCAAGAGGAAGAAATACATATTAGAAGTCATCAGATGGTAGAAACTGAAGATTATCAGCATTTGCTCCGTATAAAGCAGCATTTGCTCTGTATGAGGAATTAA 729 0.3992 MGRGKHEHCWKHVTQVENDRKWICKYCNRKFSGGASRIEAHLGLDGKGGGIRRCSNYPVVVAGNEGVHNNIMVSTSSNSLEVDLEALVNRIHSTQDQVAKGVPEVIGTHIRSSVNHQNNVEIMNLSQGYHDGTTTSFSMQSSQNTNLNSAIQFADNTISLQSKLMSVPHQAQLQRNENGMMLGMPQTATQGFHTASISNSTYRGVEDFFQEEEIHIRSHQMVETEDYQHLLRIKQHLLCMRN* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0541 242 ProSiteProfiles Zinc finger BED-type profile. 4 61 IPR003656 GO:0003677
Mal3g0541 242 Pfam BED zinc finger 9 53 IPR003656 GO:0003677
Mal3g0541 242 PANTHER CALMODULIN-BINDING PROTEIN 116 234 - -
Mal3g0541 242 PANTHER OS02G0177800 PROTEIN 116 234 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0541 Mal-Chr3 21036624 21041446 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0541 104 233 Calmodulin-binding Proteins AT5G57580 32.432 3.15e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0541 - - mtr:MTR_7g018810 192.971