Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0529 ATGTCATCCACTTCAAGTCATCCACCAGAAGCTGTGACTAATAGAGTTTATTTAGCACAAGATCAAGCAACAGAAGCAGCAATAACTACAAGTACAAGCAACACAACACAATCAAGTGAAGCAGCAGCAACAAACGAAGAAGAAACAAGAGAGAAAAGAAGATACAGAGGAGTAAGACAGAGACCATGGGGACAATGGGCAGCAGAAATTCGAGATCCACACAAAGCAGCAAGAGTATGGCTTGGAACATATGAAACTGCAGAAGCTGCAGCAAGAGCTTACGATGTAGCTGCATTAAGATTCAGAGGAAACAGAGCAAAACTCAACTTCCCTGAAAATGTTACAGCAACAAGACCAACTTTTCCGGCGACTACTTCAACCGTATCTGTTTCTTCGGCAACCCATTATGCACCTGCACCACTGCAAATGCAGCCACAACAACATCCGTTTGTTCAATTTCAAAGCTCTTCTGATTTGTCGAGAGACTATTATGAATATTCTCAGCTTCTGAAAGGAGGAGGGATTAAACATTGCCCCAATTATCATATGGCTGGTAATGAAGGAGTTCAAAACAATCTAGTACCAACTTCAAGTAATCAACCAGAAGCTATGACTAATAGAGTTTATTTAACACAAGATCAAGGTAAATGA 651 0.4071 MSSTSSHPPEAVTNRVYLAQDQATEAAITTSTSNTTQSSEAAATNEEETREKRRYRGVRQRPWGQWAAEIRDPHKAARVWLGTYETAEAAARAYDVAALRFRGNRAKLNFPENVTATRPTFPATTSTVSVSSATHYAPAPLQMQPQQHPFVQFQSSSDLSRDYYEYSQLLKGGGIKHCPNYHMAGNEGVQNNLVPTSSNQPEAMTNRVYLTQDQGK* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0529 216 MobiDBLite consensus disorder prediction 26 57 - -
Mal3g0529 216 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 19 189 - -
Mal3g0529 216 CDD AP2 54 113 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 MobiDBLite consensus disorder prediction 26 43 - -
Mal3g0529 216 PANTHER DNA-BINDING DOMAIN 19 189 IPR044808 GO:0003700|GO:0009873
Mal3g0529 216 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 SUPERFAMILY DNA-binding domain 54 113 IPR016177 GO:0003677
Mal3g0529 216 Pfam AP2 domain 54 103 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Mal3g0529 216 Gene3D AP2/ERF domain 53 113 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0529 Mal-Chr3 20830899 20831966 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0529 52 129 AP2-EREBP Transcription Factor Family AT5G13330 70.513 2.20e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g0529 AP2 6.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0529 - - aprc:113873061 162.54