Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0518 ATGGCAACGGCAACATACCCACCACCACCACCTTATTACAGGCTTTACAAAGATTACGCGCAAGACCCTCAGTCTGCTCCAGAGCCTCCACCACCAATTGAAGGAACTTATATTTGTTTCGGAGGCAGTTATACTACTAGTGATGTTTTACCAAGCTTGGAAGAACAAGGGGTTCGCCAACTCTATTCTAAAGGACCAAATATTGATTTCAAGAAGGAGCTGAGGTCACTTAATGGAGAATTGCAACTACATATTTTGGAGCTTGCTGATATTCTTATTGAAAGACCATCACAATATGCAAGGAGAGTCGAAGAAATTTCAACCGTGTTCAAAAATTTACATCACCTTTTAAATTCACTTCGTCCTCATCAGGCGAGAGCAACTTTGATTCACATTTTGGAACTTCAGATAGAGCGCCGTAAACAAGCTGTGGAGGACATAAAAAGGTATGCTTATAACCTTCATGGATAA 471 0.4076 MATATYPPPPPYYRLYKDYAQDPQSAPEPPPPIEGTYICFGGSYTTSDVLPSLEEQGVRQLYSKGPNIDFKKELRSLNGELQLHILELADILIERPSQYARRVEEISTVFKNLHHLLNSLRPHQARATLIHILELQIERRKQAVEDIKRYAYNLHG* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0518 156 MobiDBLite consensus disorder prediction 1 32 - -
Mal3g0518 156 Pfam MED7 protein 4 150 IPR009244 GO:0003712|GO:0006357|GO:0016592
Mal3g0518 156 SUPERFAMILY Mediator hinge subcomplex-like 67 153 IPR037212 GO:0016592
Mal3g0518 156 Gene3D - 60 155 IPR044888 -
Mal3g0518 156 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 151 IPR009244 GO:0003712|GO:0006357|GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0518 Mal-Chr3 20311073 20313276 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Mal3g0518 Med7 5.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0518 K15148 - gmx:100792250 261.922