Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0515 ATGTTTCCTTCCACTTATTGCTCTTTAGGTCCTTACCCTTGTTATAATCCTAATTCATCTTCTTCATCACATTCATACCCCCCTTTTACTTTCCTTACCCCTGATCAAAATGGTTCTTCAAACAACAACAACAATAATAACAACATCAACAATTTTCTTCATGATTCAGCTATTTCTGTTCCTTACACACAAACAACTCATCACCATGTTCCAATAAATCCTGAAACACTAACAAATTGGGCTGTTGCTGACTATGCAGCAATGTTGAAACAAGATCTAAGTGGTCCTTCTCATTACAATATCTCAAATTTGCTTACAAAGAAACCGGTCAAGAAACCGGTAAAGAAAGATAGGCACAGCAAGATTCACACATCTCAAGGTTTGAGAGACAGAAGGGTTAGACTTTCCATCGAGATTGCGCGGAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACACTTGAATGGCTCTTCAACAAATCTAAAGAAGCAATTGAAGAGTTAACAAGAAGCAAGAACATAGCATCCGGTGATGACGACAATGGTAACCATAGCTTCTCTTCTTCATCGTCCGATGAGGGAGATGAAGAAGATTATTCTAAAGATAGAAAGATGAAAAGGGCACAAAAAGAATCTTCGAAGACGAAGGATTCGAGGGAGAAAGCAAGAGCAAGAGCAAGGGAAAGAACAAGTGAGATGAAGATGCAAGAAGATTTGAAAGAAAAATACCCTCAAATTGATCAAAATCAACAAATCCTTCATCAATTGATGCCTAATGAAGCTGAAACTTCAAAATCACTTCAAAGAGATGATATCTTTAACTTTATTGAAGAATCTATTGTGATTAAGAGAAAGTTGAAGAAATCTTCACATCATCAACAACAAAACAATTTCTTCCCTAAGGAAACAAATTTTGATAACAATAGTGATTGTCATGACTCTCCAATGTTATCACCAAATTGGGATGCTAATAATAATAACAATGCTGGAAGATCCAACTTTTCTGCAATATCAAGAATGAATCTTTCATCAGGGCTTCAAATCGTTGGAAAATCATGGGAGGAGTGCAATACCAGTCCAAATCGATATTAG 1107 0.364 MFPSTYCSLGPYPCYNPNSSSSSHSYPPFTFLTPDQNGSSNNNNNNNNINNFLHDSAISVPYTQTTHHHVPINPETLTNWAVADYAAMLKQDLSGPSHYNISNLLTKKPVKKPVKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNIASGDDDNGNHSFSSSSSDEGDEEDYSKDRKMKRAQKESSKTKDSREKARARARERTSEMKMQEDLKEKYPQIDQNQQILHQLMPNEAETSKSLQRDDIFNFIEESIVIKRKLKKSSHHQQQNNFFPKETNFDNNSDCHDSPMLSPNWDANNNNNAGRSNFSAISRMNLSSGLQIVGKSWEECNTSPNRY* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0515 368 MobiDBLite consensus disorder prediction 27 50 - -
Mal3g0515 368 Coils Coil 210 230 - -
Mal3g0515 368 ProSiteProfiles R domain profile. 221 238 IPR017888 -
Mal3g0515 368 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 368 IPR005333 GO:0003700
Mal3g0515 368 ProSiteProfiles TCP domain profile. 115 173 IPR017887 -
Mal3g0515 368 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 23 368 - -
Mal3g0515 368 MobiDBLite consensus disorder prediction 180 194 - -
Mal3g0515 368 MobiDBLite consensus disorder prediction 177 241 - -
Mal3g0515 368 MobiDBLite consensus disorder prediction 195 241 - -
Mal3g0515 368 Pfam TCP family transcription factor 114 241 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0515 Mal-Chr3 19976205 19977436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0515 54 238 TCP Transcription Factor Family AT1G67260 41.509 6.34e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal3g0515 TCP 5.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0515 - - cam:101489716 418.698