Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0508 ATGGGTAAGAAAAAGTCAGAGGATGCAGGACCATCTACAAAGGCTAAACCAGGTAGCAAAGATGTTCCTAAGAAGGAAAAATTTTCTGTCTCTGCCATGTTGGCAGGTATGGATGAAAAAGCTGATAAGCCTAAAAAGTCTTCTTCTTCGAATAAGTCTAAACCAAAACCGGCTCCGAAAGCCTCTGCATACACTGATGATATTGATCTTCCTCCTTCTGATGATGATGAGTCTGAAGAGGAGCTAGAGGAAAAGCATAGGCCGGATTTGAAGCCACTTGAGGTGTCTATTGCTGAAAAAGAGTTGAAAAAGCGTGAAAAGAAAGATATTTTAGCTGCCCATGTGGCTGAACAGGCAAAGAAAGAAGCTCTTAGGGATGATCGTGATGCTTTCACAGTTGTGATTGGAAGTCGGGCTTCGGTGCTTGATGGAGACGATGGTGCTGATGCTAATGTCAAAGATATAACGATAGAAAATTTTTCTGTGGCTGCTCGGGGTAAAGAACTTCTGAAGAATACTTCAGTGAAGATATCTCATGGAAAACGATATGGTTTGATTGGGCCGAACGGAATGGGCAAGTCAACACTATTGAAGCTTCTTGCTTGGAGGAAGATACCGGTACCTAAGAATATCGATGTCCTTTTGGTTGAGCAAGAGGTAGTTGGTGATGATAAAACAGCGCTTGAAGCCGTTGTTTCAGCTAATGTTGAACTTATTAAAGTTCGACAAGAAGTTGCTGATCTACAAAATGTAGCTTCTGGTGAAGAAGGTGTGGATAAAGATGATACTAATGAGGAAGAGGATGTGGGAGAAAAGCTAGCAGAGCTGTATGAACAATTACAACTGATGGGGTCTGATGCTGCTGAATCTCAAGCGTCAAAGATTTTAGCTGGTCTGGGTTTTACAAAGGACATGCAGGGCCGTCCTACAAAATCCTTTAGTGGCGGCTGGAGGATGAGAATATCTTTAGCTCGGGCACTTTTTGTGCAGCCAACTCTATTATTGCTCGATGAACCCACTAATCATCTTGACCTGAGGGCTGTTCTGTGGTTAGAAGAGTACTTGTGTCGCTGGAAGAAAACTTTGGTGGTTGTATCACACGATAGAGATTTCCTCAATACAGTATGCTCTGAGATTATTCACCTGCATGATTTGAAACTTCATTTCTATCGTGGAAATTTTGATGCTTTTGAGAGTGGGTATGAACAGCGTCGTAGAGAGGCGAATAAGAAGTATGAGATTTTTGACAAGCAATTGAAAGCAGCTAGAAGAACCGGGAACAAGGCTCAACAAGATAAGGTGAAGGACCGAGCTAAGTTTGCAGCAGCTAAGGAAGCATCGAAAAGCAAAAGCAAGGGAAAGGTTGATGAGGATGAGACCCAAGTAGAGGTACCACACAAGTGGAGGGACTATAGTGTGGAGTTCCACTTTCCCGAACCTACTGAACTCACACCTCCACTTCTGCAGCTTATTGAAGTGAGCTTCAGTTACCCAAACCGAGACGATTTCAGACTATCAGATGTTGATGTTGGCATTGATATGGGGACTCGTGTTGCCATCGTTGGGCCTAATGGTGCTGGAAAATCTACACTGCTAAATCTTCTAGCTGGTGATTTGGTTCCAAGTGAAGGTGAAGTTCGAAGAAGTCAGAAGTTGAGGATAGGGAGATATTCCCAACACTTTGTGGACCTACTAACAATGGATGAAACACCTGTTCAGTACCTTCTTCGTCTCCATCCAGACCAGGAGGGACTTAGTAAGCAAGAGGCTGTCCGTGCAAAACTTGGTAAATTTGGGCTACCTAGTCATAACCATCTTACCCCCATTGTCAAACTATCGGGTGGGCAGAAAGCTCGGGTGGTATTCACGTCGATATCCATGTCAAGACCTCACATTTTATTGTTAGATGAACCCACAAATCATCTGGATATGCAAAGTATTGATGCATTGGCCGATGCGCTGGATGAATTCACTGGTGGAGTTGTTCTTGTTAGTCACGATTCTAGATTGATATCACGTGTCTGTGATGATGAAGAACGGAGTCAAATATGGGTTGTTGAAGATGGCACTGTCAGAAATTTCCCTGGAACATTTGAGGATTACAAGGAAGATTTGCTGAAAGAGATCAAAGCTGAAGTTGACGATTGA 2148 0.4316 MGKKKSEDAGPSTKAKPGSKDVPKKEKFSVSAMLAGMDEKADKPKKSSSSNKSKPKPAPKASAYTDDIDLPPSDDDESEEELEEKHRPDLKPLEVSIAEKELKKREKKDILAAHVAEQAKKEALRDDRDAFTVVIGSRASVLDGDDGADANVKDITIENFSVAARGKELLKNTSVKISHGKRYGLIGPNGMGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANVELIKVRQEVADLQNVASGEEGVDKDDTNEEEDVGEKLAELYEQLQLMGSDAAESQASKILAGLGFTKDMQGRPTKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCSEIIHLHDLKLHFYRGNFDAFESGYEQRRREANKKYEIFDKQLKAARRTGNKAQQDKVKDRAKFAAAKEASKSKSKGKVDEDETQVEVPHKWRDYSVEFHFPEPTELTPPLLQLIEVSFSYPNRDDFRLSDVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLVPSEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSRPHILLLDEPTNHLDMQSIDALADALDEFTGGVVLVSHDSRLISRVCDDEERSQIWVVEDGTVRNFPGTFEDYKEDLLKEIKAEVDD* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0508 715 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 5 715 - -
Mal3g0508 715 CDD ABCF_EF-3 155 386 - -
Mal3g0508 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 406 IPR027417 -
Mal3g0508 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 488 713 IPR003439 GO:0005524
Mal3g0508 715 SMART AAA_5 514 690 IPR003593 -
Mal3g0508 715 SMART AAA_5 179 385 IPR003593 -
Mal3g0508 715 Gene3D - 450 714 IPR027417 -
Mal3g0508 715 Pfam ABC transporter 170 341 IPR003439 GO:0005524
Mal3g0508 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 155 416 IPR003439 GO:0005524
Mal3g0508 715 PANTHER - 5 715 - -
Mal3g0508 715 Coils Coil 405 425 - -
Mal3g0508 715 Pfam ABC transporter 505 640 IPR003439 GO:0005524
Mal3g0508 715 CDD ABCF_EF-3 488 690 - -
Mal3g0508 715 Gene3D - 153 439 IPR027417 -
Mal3g0508 715 ProSitePatterns ABC transporters family signature. 313 327 IPR017871 GO:0005524
Mal3g0508 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 700 IPR027417 -
Mal3g0508 715 MobiDBLite consensus disorder prediction 1 93 - -
Mal3g0508 715 MobiDBLite consensus disorder prediction 423 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0508 Mal-Chr3 19476777 19478924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0508 488 691 Calmodulin-binding Proteins AT2G36910 28.700 7.38e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0508 K06184 - gmx:100806226 1154.43