Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0506 ATGGCAGATCCAAACTCAATAACTTTAAAAGTTTCAATAATACTAATTGTAATGCTTACATTTTATGCCAGAGACACTATAAGCGCTATTTTTCCTAAGGTAGTCGTTACAATTAAGAATGATATAGCGCCACATCCAACCCCTTTAGATCTCACTGTTCATTGCAAATCAAAAAATGATGATCTTGGATTTCACACACTCATGTTTAGAGAAATTTACGAGTTTTCATTCAGGCCTAATGTGATTCCAGATCTTAATACTTTATTCTTCTGTAGCTTTACATGGAAAGGAAGTCCATATCGTCACTATCTTGACATTTATGATGAAAGGTTGGATGACTGCATACATTGCAATTGGAAAATTAATACTACAACAGGTGGTTGTAAGGTTTTGAAGGAAGGACCAAATTATGATGTATGTCAACGTTGGAAAAGCATTGAATTAATGTCTGCAAACAATATATCCAAGATATAA 474 0.3333 MADPNSITLKVSIILIVMLTFYARDTISAIFPKVVVTIKNDIAPHPTPLDLTVHCKSKNDDLGFHTLMFREIYEFSFRPNVIPDLNTLFFCSFTWKGSPYRHYLDIYDERLDDCIHCNWKINTTTGGCKVLKEGPNYDVCQRWKSIELMSANNISKI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0506 157 Pfam Plant self-incompatibility protein S1 36 143 IPR010264 -
Mal3g0506 157 PANTHER S-PROTEIN HOMOLOG 18-RELATED 9 143 - -
Mal3g0506 157 PANTHER - 9 143 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0506 Mal-Chr3 19459178 19459651 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0506 32 148 Carbohydrate Esterase AT3G16970 40.650 9.37e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0506 - - mtr:MTR_7g018330 278.87