Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0495 ATGATGAAACCAAGAAGAGTTACATCTCTTCTTTGTTTTATATTTTTCTTGCTTTTGAGCTTTTCATGTTCAAATGCTTTGCTTTCTCCTAAAGGAGTAAACTTTGAAGTGCAAGCTTTAATGGCTATAAAAGAGTCTCTAGTGGATCTACATGGTGTTCTAGATTGGGATGCAGATTCAGTTGATCCATGTAGTTGGACTATGGTTACATGTTCTAGTGAAAGTCTTGTCACTGGCTTGGGCACTCCAAGTCAAAGTTTATCAGGTACTCTTTCTCCAAGCATAGGGAATTTAACCAACCTTCAGATGGTGCTACTACAGAATAACAACATAACCGGATCAATCCCGTCGGAATTAGGAAAACTTCCTAAGCTTCAAACTCTTGATTTGTCTAATAACTTCTTCAATGGTGAAATTCCTCCGGCTCTTGGTCACTTAAGAAGCCTTAAATACTTGAGGGTGAATAATAACAGTCTTGTTGGTGAATGTCCAGAATCACTAGCTAACATGACACAACTTGCTTTACTTGATCTGTCATACAACAATCTTAGTGGACCAGTACCAAGAATTTTGGCCAAATCATTTAGCATTGTTGGTAATCCTCTTGTTTGTGCTACTGGAAATGAACCAAACTGTCATGGGGTGACATTGATGCCAATATCCATGAACCTAAACAATACTCAAGATTCTCTATCACCAAGCAGACCAAAAAGTCATAAAATGGCTATTGCATTTGGCTTGAGTCTTGGATGTCTCTGCCTAATAGTTATTGGTTTTGGACTTGTTCTTTGGTGGAGACACAAGCATAATCAACAAGCATTCTTTGATGTCAAAGACCGGCACCATGAAGAAGTATACCTAGGAAACTTGAAGAGGTTTCCATTCAGAGAACTTCAGATTGCTACTCACAACTTCAGCAACAAAAACATACTTGGAAAAGGTGGTTTTGGAAATGTCTACAAAGGAATTCTTTCAGATGGAACTGTTGTAGCTGTAAAGAGGCTTAAAGATGGAAATGCAAGTGGAGGAGAGATTCAATTTCAGACTGAAGTTGAAATGATTAGCCTTGCAGTTCATAGAAACCTTCTCAGACTTTATGGATTTTGCATGACATCATCAGAAAGGCTTTTGGTTTATCCTTACATGTGCAATGGAAGTGTTGCTTCTCGTTTGAAAGGTAAACCAGTGTTGGATTGGGGAACAAGGAAGAACATTGCATTAGGAGCAGCAAGGGGACTATTATACCTTCATGAGCAATGTGATCCAAAGATAATCCATAGAGATGTGAAAGCTGCAAACATATTGCTCGATAACTATTACGAAGCTGTCGTAGGTGATTTTGGTTTAGCAAAGCTTTTGGATCATCAAGATTCACATGTCACAACTGCAGTGAGAGGAACTGTAGGGCATATTGCACCGGAATATCTTTCCACAGGACAATCCTCAGAGAAGACTGATGTGTTTGGATTTGGAATTCTTCTTCTTGAATTGATCACTGGCCAGAGAGCCTTAGAATTTGGAAAAGCTTCTAACCAAAAAGGAGCCATGCTTGATTGGGTGAAGAAAATTCATCAAGAGAAGAAACTTGAATTACTTGTAGACAAAGATCTAAAAAGCAACTATGACAAAATTGAGCTTGAAGAAATGGTTCAAGTGGCTCTCTTATGTACTCAATTCCTTCCAAGCCATAGACCTAAAATGTCTGAAGTTGTAAGAATGCTTGAAGGTGATGGACTAGCTGAGAGATGGGAAGCTTCCCAAAAAACTGACACTTCCAAATTCAAACATCAAGAATCATCTTTATCAGATAGATATTCTGATCTTACTGATGATTCTTTGTTATTAGTCCAAGCTATGGAGCTTTCAGGACCAAGGTGA 1878 0.385 MMKPRRVTSLLCFIFFLLLSFSCSNALLSPKGVNFEVQALMAIKESLVDLHGVLDWDADSVDPCSWTMVTCSSESLVTGLGTPSQSLSGTLSPSIGNLTNLQMVLLQNNNITGSIPSELGKLPKLQTLDLSNNFFNGEIPPALGHLRSLKYLRVNNNSLVGECPESLANMTQLALLDLSYNNLSGPVPRILAKSFSIVGNPLVCATGNEPNCHGVTLMPISMNLNNTQDSLSPSRPKSHKMAIAFGLSLGCLCLIVIGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFPFRELQIATHNFSNKNILGKGGFGNVYKGILSDGTVVAVKRLKDGNASGGEIQFQTEVEMISLAVHRNLLRLYGFCMTSSERLLVYPYMCNGSVASRLKGKPVLDWGTRKNIALGAARGLLYLHEQCDPKIIHRDVKAANILLDNYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKASNQKGAMLDWVKKIHQEKKLELLVDKDLKSNYDKIELEEMVQVALLCTQFLPSHRPKMSEVVRMLEGDGLAERWEASQKTDTSKFKHQESSLSDRYSDLTDDSLLLVQAMELSGPR* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0495 625 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Mal3g0495 625 SUPERFAMILY Protein kinase-like (PK-like) 282 575 IPR011009 -
Mal3g0495 625 Gene3D Ribonuclease Inhibitor 33 214 IPR032675 -
Mal3g0495 625 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Mal3g0495 625 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Mal3g0495 625 SMART serkin_6 305 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0495 625 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0495 625 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 8 625 - -
Mal3g0495 625 SUPERFAMILY L domain-like 47 201 - -
Mal3g0495 625 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 625 - -
Mal3g0495 625 Gene3D Transferase(Phosphotransferase) domain 1 382 594 - -
Mal3g0495 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Mal3g0495 625 Pfam Protein kinase domain 306 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0495 625 Pfam Leucine Rich repeats (2 copies) 99 139 IPR025875 -
Mal3g0495 625 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0495 Mal-Chr3 18894980 18899350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0495 9 625 Receptor kinase-like Gene Family AT5G16000 77.440 0.0 979
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mal3g0495 Pkinase 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0495 - - gmx:100798412 1101.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4424 6 126487415 126492482 Mal3g0495 3 18894980 18899350 PCT