Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0485 ATGCAAACCAGAGAGATTAATACAGGACTCAATTATTTACTCCCAAATATAGATCCATCTCCCTATCCATCATGTAACTATAACATGATCCAAAACACCATCCAAACACCTCAACATCCAAAATTCTCCAACCAATTCTATGGTTTCAACCAAAACCCTCTTCAAATTCTCCAAGACTTCAGTCCTCCATCCTCATGCATAAGCAGCAACTCAACTTCCGACGAAGCGGACGAACAAAACAAAGGTCTAATCAACGAAAGAAAACATCGAAGAATGGTATCGAACCGAGAGTCAGCACGCCGGTCGCGAATGAGGAAACAAAAACAGCTTGATGAGCTTTGGTCACAGGTGGTTTGGCTTAGGAATGAGAATCATCAATTACTAGATAAGCTCAACAATTTTTGTGAGACTCATGAAAGAGTTGTCCAAGAGAATGTTCAATTGAAAGAACAAGCTTCAGAACTTAGACAAATGGTGTGTGATATGCAGTTGCATAGTTCTTGTCTTCCTTTGAGTCCTCTTGAAGATGTTCCTAGCATCACTTCACCAAATGTTAAATCTGATTCTTCAAACCAATGA 579 0.3955 MQTREINTGLNYLLPNIDPSPYPSCNYNMIQNTIQTPQHPKFSNQFYGFNQNPLQILQDFSPPSSCISSNSTSDEADEQNKGLINERKHRRMVSNRESARRSRMRKQKQLDELWSQVVWLRNENHQLLDKLNNFCETHERVVQENVQLKEQASELRQMVCDMQLHSSCLPLSPLEDVPSITSPNVKSDSSNQ* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0485 192 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 85 148 IPR004827 GO:0003700|GO:0006355
Mal3g0485 192 MobiDBLite consensus disorder prediction 79 104 - -
Mal3g0485 192 SMART brlzneu 83 147 IPR004827 GO:0003700|GO:0006355
Mal3g0485 192 Coils Coil 138 158 - -
Mal3g0485 192 MobiDBLite consensus disorder prediction 171 192 - -
Mal3g0485 192 MobiDBLite consensus disorder prediction 177 192 - -
Mal3g0485 192 SUPERFAMILY Leucine zipper domain 87 137 IPR046347 GO:0003700|GO:0006355
Mal3g0485 192 CDD bZIP_plant_GBF1 88 132 IPR045314 GO:0003700|GO:0006355
Mal3g0485 192 Gene3D - 85 139 - -
Mal3g0485 192 MobiDBLite consensus disorder prediction 63 104 - -
Mal3g0485 192 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 191 IPR044521 -
Mal3g0485 192 MobiDBLite consensus disorder prediction 63 78 - -
Mal3g0485 192 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 90 105 IPR004827 GO:0003700|GO:0006355
Mal3g0485 192 Pfam bZIP transcription factor 87 137 IPR004827 GO:0003700|GO:0006355
Mal3g0485 192 PANTHER BZIP TRANSCRIPTION FACTOR 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0485 Mal-Chr3 17962996 17963574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0485 11 169 bZIP Transcription Factor Family AT3G30530 57.317 3.61e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal3g0485 bZIP_1 3.5e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0485 - - aprc:113863596 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4435 6 126813407 126814009 Mal3g0485 3 17962996 17963574 PCT