Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0478 ATGACAATTGGAAGTCTTGCACCTAAGACAGAGAAGAAGAAATCATCGAAATCATCACGAAAGAACAAGGCTGTTGTCAATGAAAATGCACCTTTGTTGCCTAAGAGTCAAGAAAGTGATTCAGGGTTTGATGATTTCAATGGAGCTTCATTTTCCGGTGCCGTTTTCAACTTGGCGACTACGATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACTTTGAAACAGTTGGGGTTGATTCCTGGTCTTTGTGCTATCCTCTTGATGGCTTTTTTGACTGAAAAGTCAATTGAGCTTTTGATAAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCTCAGATCTGTGTTATTGTCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTACTTTCTGGAACATCTGCAAGTGGTGAACATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACCGGGAGGACATTTGTTGTTCTTCTTACAACGGTTGCTGTATTTACACCCCTCGCAAGCTTCAAGAGAATTGATTCGTTGAGATTCACATCTGCCCTTTCTGTTGCCCTGGCGGTTGTTTTTCTTGTCATTGCTGTGGGAATTTCTGTTGTCAAGATTATAAGTGGAGGCGTTAGCATGCCGAGACTCTTCCCAGCTGTTACCGATGCAACATCAATTGTTAACCTATTCACTGTGGTTCCTGTGTTTGTGACTGCCTATATCTGTCACTACAATGTTCACAGCATAGATAATGAACTCGAGGACAACTCGCAGATGCAAGGCGTTGTACGTACAGCCCTCGGTCTATGCTCATCCGTGTATTTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGTGAAGGTACTCTTGATGACGTGCTTGCCAATTTCGATGCTGATCTAGGAATTCCTTTTGGTTCTTTGCTCAACGATGCTGTTCGTATTAGCTACGCTGCACACCTCATGCTTGTATTTCCAGTTGTGTTTTTCCCATTGCGACTCAACATAGACGGTCTTCTCTTCCCTAAATCAAGGCCTTTGGTTCTGGATAACTTCAGATTCGCTTCAATGACTGTTTCCCTTATTGGTGTTATCTTCTTGGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCCGCAGTCTGTATAGGATTCATCTTTCCAGCTGCCATCACTCTTAAGGACCGCTACAACATAGCGACTAAATCAGACAAGATTTTATGCATTGTTATGATAGTCCTAGCAGTCTTCTCAAACATTGTCGCTATATACAGTGACGCCTATGCCTTGATCAAGCAGAACAAAACTTCACGCGAATGA 1404 0.4259 MTIGSLAPKTEKKKSSKSSRKNKAVVNENAPLLPKSQESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLIPGLCAILLMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSASGEHHYGILEGWFGVHWWTGRTFVVLLTTVAVFTPLASFKRIDSLRFTSALSVALAVVFLVIAVGISVVKIISGGVSMPRLFPAVTDATSIVNLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDADLGIPFGSLLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFPKSRPLVLDNFRFASMTVSLIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATKSDKILCIVMIVLAVFSNIVAIYSDAYALIKQNKTSRE* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0478 467 PANTHER AMINO ACID TRANSPORTER AVT6A 13 465 - -
Mal3g0478 467 PANTHER AMINO ACID TRANSPORTER 13 465 - -
Mal3g0478 467 MobiDBLite consensus disorder prediction 1 39 - -
Mal3g0478 467 Pfam Transmembrane amino acid transporter protein 49 452 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0478 Mal-Chr3 17730126 17733801 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0478 3 467 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.817 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0478 K14207 - gmx:100796345 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4443 6 127088549 127094382 Mal3g0478 3 17730126 17733801 PCT