Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0457 ATGGCCAGGTCTGCTAAAGGCCATCAAGATGAAGATTTGGTTGATGATGATGACGATCCTGACCTCTTCACTCCAAACACTTCTTCCTCTCTCAACAACAACAATGTGAAGGTGGATGAACCCATCAGAGGGAAAAGGGCTAACCCTCATCGTTCTAAGCATTCAGAAACTGAGCAGCGTAGAAGAAGCAAAATTAATGAAAGATTTCAGGCTCTGAGAGATCTTATACCTGAAAATGATTCAAAAAGAGATAAAGCTTCCTTTTTGTTGGAGGTTATTGAGTATATTCAGTTCTTACAGGAAAAGTTACAAATTTATGAACAGTCTTATGAAGGATGGAATCAAGAGCCAACTAAATTAATTCCATGGAGAAATCATCACGGACCTTCTGAAAATACTACAGATCCTTCTCGAGCTATTCAAAATGGGTCTGTTGATGGAAAAAATAACAATGTCTCTCCATCATTGCCTAAAAATGTACGAAACCCAATAGTGTCTGACCCCTCCACAAGTATTCAGAAGGGTTGCACCCCTAGTTCATCCACAGAAGTAGTTCCCCTTACCATGCAAATGCGATTGGACATGTTTGATCCGGTTGTTAGCGGTGGTATGGTGACTCAACAAATGCTAGAGTTGCCTGTATCTAATGCTGACATGGCTTACCATCTCCAGCCTCAAGTATGGCTTAGCAAACCAAACAAGGACAACTATATTGTTCCAGATAATACATTGAAGGAACAAGAGGAGATGAAAAATGAAAGTGGATCAGAATCAGATAGCATCTCAAGTGCCTATTCTCAAAGAATATTGGGTACTCTCACCCAAGCGCTACAATCTTCAGGTGTAGATTTGTCCCAGACCAATGTCTCAGTGGAAATTGATGTTGGTAGACGAGCAAATACTGGATTGACCCCCTGCCAATATAACTCAAAGAGTAATGAAAATCAATTTGTGAGCAATCAAGCAATGATATGTTCAGGAATGGATTACTTCAGTGAGGATTCTGAACAGAGTCCAAAGAGGTTCAGAAGAGAAGCAATCTAG 1044 0.4033 MARSAKGHQDEDLVDDDDDPDLFTPNTSSSLNNNNVKVDEPIRGKRANPHRSKHSETEQRRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIQFLQEKLQIYEQSYEGWNQEPTKLIPWRNHHGPSENTTDPSRAIQNGSVDGKNNNVSPSLPKNVRNPIVSDPSTSIQKGCTPSSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELPVSNADMAYHLQPQVWLSKPNKDNYIVPDNTLKEQEEMKNESGSESDSISSAYSQRILGTLTQALQSSGVDLSQTNVSVEIDVGRRANTGLTPCQYNSKSNENQFVSNQAMICSGMDYFSEDSEQSPKRFRREAI* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0457 347 MobiDBLite consensus disorder prediction 39 64 - -
Mal3g0457 347 Coils Coil 96 116 - -
Mal3g0457 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 49 128 IPR036638 GO:0046983
Mal3g0457 347 Gene3D - 47 120 IPR036638 GO:0046983
Mal3g0457 347 SMART finulus 55 105 IPR011598 GO:0046983
Mal3g0457 347 CDD bHLH_AtBIM_like 51 124 - -
Mal3g0457 347 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 345 IPR044295 GO:0003700|GO:0006351|GO:0046983
Mal3g0457 347 MobiDBLite consensus disorder prediction 23 37 - -
Mal3g0457 347 Pfam Helix-loop-helix DNA-binding domain 51 100 IPR011598 GO:0046983
Mal3g0457 347 MobiDBLite consensus disorder prediction 1 64 - -
Mal3g0457 347 MobiDBLite consensus disorder prediction 127 181 - -
Mal3g0457 347 MobiDBLite consensus disorder prediction 121 181 - -
Mal3g0457 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 49 99 IPR011598 GO:0046983
Mal3g0457 347 PANTHER TRANSCRIPTION FACTOR BIM3 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0457 Mal-Chr3 17392829 17398565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0457 3 311 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 39.498 9.06e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal3g0457 HLH 1.5e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0457 - - mtr:MTR_7g017320 598.586