Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0412 ATGAGGCTACTCATATCGGTTCTATGTGTCATTGTGCTATTTTCTTATGCAGCTGCGTATGATCCTTTGGATCCTAACGGAAACATAACGATCAAATGGGATGTTGTATCTTGGACACCAGATGGCTATGTGGCAGTGGTAACAATGAGCAATTTCCAAATGTACCGCCACATCATGAATCCAGGATGGACATTAGGATGGTCATGGGCAAAGAAAGAAGTTATATGGTCAATGGTAGGATCTCAAACAACTGAGCAAGGAGATTGTTCTAAATTCAAAGGCAATGTACCTCATTGTTGCAAGAAAACTCCTACAGTTGTAGACCTTCTCCCTGGTGTACCTTACAATCAACAATTCTCAAATTGCTGTAAAGGTGGAGTTGTAGCAGCATGGGGACAAGACCCTTCATCAGCTATTTCATCTTTCCAAATTAGTGTTGGACAAGGTGGTACTTCAAACAAGACAGTGAAACTCCCTAAGAACTTCACTCTCTTGGCTCCAGGACCTGGCTATACTTGTGGTCCTGCTAAGGTTGTTCCTTCCACCACTTTCCTCACCACGGATAAGCGCCGCAAGACTCAAGCACTTATGACATGGAATGTTACCTGCACATACTCACAATTTCTTGCAAGAAAGAATCCAAGTTGCTGTGTATCTTTGTCATCCTTCTATAATGGAACAATTACTCCTTGCCCTTCTTGTGCGTGCGGCTGCCAGAACAAGAAGAATTGTGTCAAGGGTCATTCCAAATTCCTAGACATGGTAGGGTTACATACTCCAAAGAGAGACAATGAACCATTGCTGCAGTGCACCCATCATATGTGCCCCATTAGGGTACACTGGCATGTGAAGACCAACTATAAGGACTATTGGAGAGTCAAGATTGCTGTTACAAATTTCAATTATAGATTGAATTATTCTCTTTGGACTCTTGCTGTACAACATCCAAATCTTAACAATGTCACCCAAGTTTTCAGCTTTGATTACAAGCCTTTGCTTCCCTATCAATCCATAAATGACACAGGTATGTTCTATGGAATGAAATTCTTTAATGATCTGTTGATGGAAGCTGGACCAGGTGGAAATGTTCAATCAGAAGTGCTTCTTCAAAAGAACAAGGAAACATTCACACTCAACCAAGGTTGGGCATTTCCTAGAAGAGTCTACTTCAATGGTGAAGAATGCATGATGCCTTCACCTGATTCCTACCCTTACCTCCCTAATTCTTCACCTGTCAATGTCCTCAACTTCCCAACATTCATTACCTCATTGGTTCTCTTGCTAGCTCTTTGGTGA 1296 0.4182 MRLLISVLCVIVLFSYAAAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMSNFQMYRHIMNPGWTLGWSWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFSNCCKGGVVAAWGQDPSSAISSFQISVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTTDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNGTITPCPSCACGCQNKKNCVKGHSKFLDMVGLHTPKRDNEPLLQCTHHMCPIRVHWHVKTNYKDYWRVKIAVTNFNYRLNYSLWTLAVQHPNLNNVTQVFSFDYKPLLPYQSINDTGMFYGMKFFNDLLMEAGPGGNVQSEVLLQKNKETFTLNQGWAFPRRVYFNGEECMMPSPDSYPYLPNSSPVNVLNFPTFITSLVLLLALW* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0412 431 PIRSF COBRA 1 431 IPR006918 GO:0010215|GO:0031225
Mal3g0412 431 PANTHER PROTEIN COBRA 4 429 IPR006918 GO:0010215|GO:0031225
Mal3g0412 431 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0031225
Mal3g0412 431 PANTHER COBRA-LIKE PROTEIN 4 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0412 Mal-Chr3 15407971 15411465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0412 1 427 COBRA Gene Family AT3G29810 65.158 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0412 - - gmx:100783410 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0412 3 15407971 15411465 Mal6g4483 6 128060745 128087263 PCT