Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0411 ATGGGTTTCTCTTTCTTATCAAAATCATCTCCTTGCATTTTGTTCTTGTTTCTACTTTCTTTCACTTCAACAGATGCTTATGATCCACTTGACCCAAATGGGAATATCACAATCAAATGGGATATTATACAATGGACCCCTGATGGTTATGTTGCCACTGTTACGATGAACAACTTCCAACAATATCGTCACATTGCTGCCCCTGGCTGGTCACTAGGATGGACATGGGCAAAAAAGGAGGTAATCTGGAGCATGATGGGATCACAGACCACCGAACAAGGCGATTGTTCAAAATTTAAAGGAAATGTTCCACATTGCTGTAAAAAGAATCCAACCGTTGTAGATTTACTTCCCGGAACGCCTTACAATCAGCAAATTGCTAATTGCTGCAAAGGTGGTGTGCTCACTTCATGGGCTCAAGATCCTACCAATGCAGTTGGATCGTTTCAAGTTAGTGTTGGTAGAGCCGGAACCACAAATAAAACTGTTAAAGTGCCTAAAAACTTCACCTTGAGTGCCCCTGGACCCGGTTATACTTGTGGGCCGGCAAAAATTGTGAGACCTACTCAGTTTATTCAACCAGACAAGAGGAGAGTGACACAAGCACTCATGACATGGAATGTTACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACGTGCTGTGTTTCCCTCTCATCTTTCTATAACGAGACCATTGTACCATGCCCAACATGTGCATGTGGCTGCCAGAGTAACTCATCTCAGTCGGGGACTTGTGTTAATCCAAAGACGCCACATTTGGCATCAGTTGTTTCTGGTAACGGAAAGAATAATTTATCACCTTTGGTTCAATGTACTAGTCATATGTGTCCAATCCGAATCCACTGGCATGTTAAGGTTAACTACAAAGAATACTGGCGTGTGAAGGTTTCCATTACTAATTTTAATTACCGGATGAATTATTCCGATTGGAACTTGGTTGTTCAGCATCCAAACTTCGACAATCTGACTCAGCTGTTCAGTTTCAACTACAAGTCATTAAATCCTTATGTTTCAATAAATGATACAGCAATGCTTTGGGGAGTTAAGTTCTATAATGATTTTCTTAATCACGCCGGTCCTAGTGGCAATGTTCAATCCGAGCTACTCTTTCGAAAGGATAAATCAACTTTCACTTTTGATAAGGGCTGGGCTTTCCCTCGGAGGATCTACTTCAACGGTGACAACTGTGTGATGCCACCACCTGATGCTTATCCATGGTTACCTAATGCTGGTTCTCGGCAAGAGGTTTCATTGTTTGCTTTAGTAATGGCCTCCTTGGCAGTCTTAGTATTTTATGCATACGTTTAA 1338 0.4163 MGFSFLSKSSPCILFLFLLSFTSTDAYDPLDPNGNITIKWDIIQWTPDGYVATVTMNNFQQYRHIAAPGWSLGWTWAKKEVIWSMMGSQTTEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLTSWAQDPTNAVGSFQVSVGRAGTTNKTVKVPKNFTLSAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNETIVPCPTCACGCQSNSSQSGTCVNPKTPHLASVVSGNGKNNLSPLVQCTSHMCPIRIHWHVKVNYKEYWRVKVSITNFNYRMNYSDWNLVVQHPNFDNLTQLFSFNYKSLNPYVSINDTAMLWGVKFYNDFLNHAGPSGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNAGSRQEVSLFALVMASLAVLVFYAYV* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0411 445 PANTHER PROTEIN COBRA 5 444 IPR006918 GO:0010215|GO:0031225
Mal3g0411 445 Pfam COBRA-like protein 50 213 IPR006918 GO:0010215|GO:0031225
Mal3g0411 445 PIRSF COBRA 3 445 IPR006918 GO:0010215|GO:0031225
Mal3g0411 445 PANTHER COBRA-LIKE PROTEIN 5 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0411 Mal-Chr3 15403195 15407074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0411 1 443 COBRA Gene Family AT3G02210 74.501 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0411 - - gmx:100783820 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4483 6 128060745 128087263 Mal3g0411 3 15403195 15407074 PCT
Mal3g0411 3 15403195 15407074 Mal6g4484 6 128102000 128105946 PCT