Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0410 ATGGCTCAATCTTTCGGACAGACCGAGATTAATTGGGACAAGCTAGATAAAACTAAGTTCTATGTCGTTGGAGCTGGACTCTTCACTGGTGTTACGGTGGCACTTTACCCTGTTTCAGTTGTGAAAACTAGGCTGCAGGTTGCAACAACGGGCGCTGCAGAGAGAAATGCCTTATCTGTTGCCAAAGGATTACTTAAAACAGATGGCATCCCTGGTTTGTATAGGGGGTTCGGTACGGTTATCTTTGGTGCAATACCGACCAGAATCATATTCCTCTCAGTTCTAGAGACCACAAAGGTGTCTGCCTTTAAAATGCTGCAACCATTTGGACTATCTGAAACTACACAGGCTGCATTAGCAAATGGAGTTGCAGGCATGACATCGTCACTTTTTGCTCAATCTGTGTTTGTACCAATTGATGTGGTTAGCCAAAAGTTGATGGTGCAAGGATACTCAGGACATGCCAAATATAGTGGAGGTCTGGATGTTGCTCGTAAGATTTTAAAGTCTGATGGCATTCGTGGATTGTATCGAGGGTTTGGTCTTTCTGTTGTTACTTATTCACCTTCTAGCGCAGTGTGGTGGGCAAGTTATGGTTCAAGCCAACGCTTCATTTGGAGACACTTGGACCAAGGTGGAAAATATGATGAAGGCAGTCCTAGTGTGCAGAAGATTATGTTAGTTCAGGCTGCGGGAGGGATTATAGCTGGTGCAACTGCTTCCTGCATTACAACCCCATTGGATACTATCAAGACACGGTTACAGGTGATGGGACATGATAACAAAAGCTCTATAAAACAAGTTGCTAAAGATTTAATCAAAGAAGATGGTTGGAAAGGCCTATATAGAGGGTTTGGTCCAAGATTTTTTAGCATGTCAGCTTGGGGCACTTCAATGATATTGACTTATGAGTATCTGAGTAAGATCTCTTCCTTTTGTGGTTTATATTCTTTCTTTGTGTGTATCTGCACTTGTGTTTTTGTTTGTGCTATTTATCTGCGATTGACATTTATTAGAGGAAGAACCGGGGTAAAATTAAACCAAAGCCTTAAAGGTTCTATGCATGAGCTTATTGATGGTTTGTTTGGATTGAATTATTTGAGCTTATCTACTGGCATACACACTTGTGAGACTGTTTAG 1140 0.4167 MAQSFGQTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVATTGAAERNALSVAKGLLKTDGIPGLYRGFGTVIFGAIPTRIIFLSVLETTKVSAFKMLQPFGLSETTQAALANGVAGMTSSLFAQSVFVPIDVVSQKLMVQGYSGHAKYSGGLDVARKILKSDGIRGLYRGFGLSVVTYSPSSAVWWASYGSSQRFIWRHLDQGGKYDEGSPSVQKIMLVQAAGGIIAGATASCITTPLDTIKTRLQVMGHDNKSSIKQVAKDLIKEDGWKGLYRGFGPRFFSMSAWGTSMILTYEYLSKISSFCGLYSFFVCICTCVFVCAIYLRLTFIRGRTGVKLNQSLKGSMHELIDGLFGLNYLSLSTGIHTCETV* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0410 379 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 7 310 - -
Mal3g0410 379 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 7 310 - -
Mal3g0410 379 Pfam Mitochondrial carrier protein 228 308 IPR018108 -
Mal3g0410 379 Pfam Mitochondrial carrier protein 118 207 IPR018108 -
Mal3g0410 379 Pfam Mitochondrial carrier protein 25 101 IPR018108 -
Mal3g0410 379 SUPERFAMILY Mitochondrial carrier 13 306 IPR023395 -
Mal3g0410 379 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Mal3g0410 379 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Mal3g0410 379 PRINTS Mitochondrial carrier protein signature 177 195 IPR002067 GO:0055085
Mal3g0410 379 Gene3D Mitochondrial carrier domain 18 312 IPR023395 -
Mal3g0410 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 204 IPR018108 -
Mal3g0410 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 309 IPR018108 -
Mal3g0410 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 17 101 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0410 Mal-Chr3 15364560 15370722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0410 10 309 Chloroplast and Mitochondria Gene Families AT5G15640 76.159 1.95e-166 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0410 K15121 - gmx:100781796 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4485 6 128107221 128111622 Mal3g0410 3 15364560 15370722 PCT