Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0409 ATGGACGATGAGGTGAAGATCATACATCAATGTCAAGTGAGTCCTGCACAAGGTTCTCTTCCCCCTTCAATTACCATTCCATTAAGTCACCTTGACCTCCCTTGGTTTAATTGTCCCCATATGAAAAGAATTTTCTATTACAACTTCCCTCATTCTACCCAACACTTCCTTCAAACTTCACTCCCAATTCTCAAAAACTCTCTTTCCCTCACTCTCCAACATTTCTTCCCTTTCTCCTCTAAAATCATCTTCCCTCCTAAGCCTCAAACCCCTCACATTCTCTACTCTCAAGGTGACTCCATCTCATTAACAATTTGTGAGTCCAAATCAAACTACAACCATCTCATATCCAATTCACCAAAAGATCCTACAATTACATACCCTTTTGTTCCTTTGATTCCTCCTTCACGTATTTTAGAAGATGGCACATTCTTGATCCCAACAATGGCCATTCAAATCACTATTTTTCCAAACTTTGGATTCACAATTTGTCTCACTTTTAGACACGTAATTGCTGATGGTAAAGCATTTCATCATTTCATTAAATTTTGGTCCTCACTTTCAAAAGGAAACTTAGAAAATTCTTCTCTTTCGTTACCATTACACAAAAGAGAAATGATTCAAGACCCAAAAAATCTTAAAATGAGTATTTTGGAACAACTTTGGAATTCTCCACCAAAAACATTACAACCTACTACCTCCACCCATAACCATGTTGTTTCTAATAACAACATGGTTCGTCATAAAATTAATTTGACACGTCACCAAGTTGAAAATTTGAAGAAGTGGGTTGTTACAAAAAGTCAAACTATTGGTCTTGACATATCCCATTTGTCAACCTTTGTTGTTACATGTTCTTTGTTTTGGGTTTGCATGGTAAAATTAAAAGCTGATTGTGTTTCAGACAAGGTAACGAAGAATTTTCCTCATGAGAATGATTTTGAGGATAATTACGGTTTTAAATTTCTAATGGATATGCGTAACTGTTTTGAGTTTTCTATTCCTTCCACATATTTTGGAAATTGTTTGGCATTCTGTCGTGCGATACTACCAAAGAAGATGTCAGTGGGAGAGAATGGTATATGTGAAGCAGCAAATGTTATTGGAAGAGAAATTAGTAATAAATTGAGAGATCCTTTAAAAGAAGTTGAAGAATTGGATATAAAGTCACAAAATACAATTTATGTTGCGGGGTCACCAAAGTTTGATTTTTTTGAAACTGATTTTGGTTGGGGGAAGCCTGTTTTAACTGAAGAGGTCAATGTGCAAGATTCAAATACTTTGTATCTTTCTGATTCTAGAGATGAAGATTGTGTTGTTGAAATTGCTATAGTGCTAGAAGGAGCTCATGTGAAGAAATTTAATGACATCTTAGAAGTGCAACTTAGAGACATTGTGGCTCCCAATTGA 1410 0.3553 MDDEVKIIHQCQVSPAQGSLPPSITIPLSHLDLPWFNCPHMKRIFYYNFPHSTQHFLQTSLPILKNSLSLTLQHFFPFSSKIIFPPKPQTPHILYSQGDSISLTICESKSNYNHLISNSPKDPTITYPFVPLIPPSRILEDGTFLIPTMAIQITIFPNFGFTICLTFRHVIADGKAFHHFIKFWSSLSKGNLENSSLSLPLHKREMIQDPKNLKMSILEQLWNSPPKTLQPTTSTHNHVVSNNNMVRHKINLTRHQVENLKKWVVTKSQTIGLDISHLSTFVVTCSLFWVCMVKLKADCVSDKVTKNFPHENDFEDNYGFKFLMDMRNCFEFSIPSTYFGNCLAFCRAILPKKMSVGENGICEAANVIGREISNKLRDPLKEVEELDIKSQNTIYVAGSPKFDFFETDFGWGKPVLTEEVNVQDSNTLYLSDSRDEDCVVEIAIVLEGAHVKKFNDILEVQLRDIVAPN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0409 469 Gene3D - 4 230 IPR023213 -
Mal3g0409 469 Gene3D - 242 464 IPR023213 -
Mal3g0409 469 PANTHER - 3 466 - -
Mal3g0409 469 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 3 466 - -
Mal3g0409 469 Pfam Transferase family 5 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0409 Mal-Chr3 15346062 15348249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0409 29 458 Monolignol Biosynthesis Gene Families AT5G48930 20.088 1.74e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0409 - - mtr:MTR_7g015860 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal6g4487 6 128128354 128129742 Mal3g0409 3 15346062 15348249 PCT