Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0399 ATGGAAAACTCCACAAACAAAAAAATTCACACTAAAATCACCCAACTATCTCTCATTCTTCTATTGTTCCCTCTAGTTGCTTATTCATACACCCCTGATTATAATTTAGCCATCAATTGTGGTTCCTCAACAAACAATGTTGCCTTAGATAAAAGAATGTGGATTGGTGATAATATTGATAACACAAATCTCTTTACTTTCATTGAACCAAAAACCACAATCCCCTCTCTTAATATATCACCTAATTCCCTCTCAAATACCCAAATTCCATACACAACCGCACGTGTGTCTCTCTCAAATTTCACATACTCATTTTCTACCATCACTAACTCCCCTGTTTTTCTTCGCTTTCATTTTTATCCAACATTGTATCAAAATTTTGAACCTTCAAAATCCTTTTTTTCTGTTAAAGTAAACAACAACCTTACCCTTCTTAAAAACTTCAACCCTTTACTTTCGATTCATGATGATGATGAAAAAATCACCAAAGAATATTGCATCCAAATCAAACCAAATGAGAACCTAAACATCACTTTCATTCCCAACAACATAAACCGATCAAATCCTTATTATGCTTACATTAACGGAATCGAAGTTGTGTCAATGCCTTCTTTTCTCTATTACACAAACCTCAGTGACCAAGATTATCATTTAAAAGCACTTGGGTTAGACATCATCGATTACCAAGTTCATAACGACACAACTTTAGAGACAGTTTATAGAGTCAACGTCGGTGCAAATCAAGTTTCACCAAACCAAGATACAGGTATGTTTCGTAATTGGGACAATGATTATCCTCGTTACTTGAAGAAACAATATCCACTAAGTGTGTCAAGTTATTATGGACAAGATCATCTTAAGTATTTAAAAAATACTGCTCCAAATTACACTGCACCAGAAGCTGTATACTTTACTGCAAGAAGTTATGGAAAGTATGTGACAGAGGATTACAATGTAACTTGGAATTTTGAAGTTGATTCTGGTTTTACTTATATGGTAAGGTTACATTTTTGTGAGTTTAATCAGCTTATCAATTCTGAAGGTGATAGAGCCTTTCAGATTTTCATAGATAATAGTTTCGCTGAGGAAAACGCTGATGTGATAAGGTGGAGTGGCGCTCCTATGGTTCCTGTTCATAAGGATTATGCTGTGCCTATGTACTCTGAAGGATTAATTTCTCAAATTGAAAGAGTCAATCTTTCTCTTAAGCTTCAACGAGTACCACCAAATATCTACACAAAATACCGTGATGTCACACTCAACGGAATCGAGATTCTCAAAATAAGTGATAAAAATAACAATCTTGCTGGTTTGAATCCCAACAAACACATTATACTATCATCTCCAAATCAACAATCGAAGTCAAAGAAGTCAACCATAGTCATGGTTGATGTGGTTGGAGTTTCATGTCTCTTGCTAGCATTTGTAGTGGGAATACTAGTTTTTCAGACAAATAATGAAGGTTCGTCAACTTTACCATCCCATTTGTGTCGCTATTTTACAATAGCGGAGATAAGAGATGCTACTAATGACTTCGAAGATATTTTTATCATCGGGGTTGGAGGGTTCGGCAATGTGTACAAGGGTTACATCGATGGAGTTACACCTGTTGCGATAAAACGTCGTAAACCGGGTTCTAGACAAGGTGTAAATGAATTCAAGAATGAGATCGAGTTGCTCTCTCAGCTTCGTCATATTCACTTGGTTTCCCTCATTGGATATTGCAACGAAGACGCGGAGATGATACTAATTTACGACTTCATGGAACGGGGCACTCTTCGTGAACATCTCTACGGTTCGGATAACAAACCTCTTAGGTGGAATCAGAGACTCGAGATTTTATTGGGTGCAGCAAGGGGGTTGCATTATCTTCACGCAGGTGCGAAGTACAATATCATACATCGTGACATTAAGAGTACAAACATATTGTTGGATGAAAAATTGGTGGCTAAGGTTTCTGATTTCGGCTTATCAAAAGTTGGACCCACAGGGATATCAATGACTCATCTCAGCACTATGGTGAAGGGAAGTATAGGATATTTGGATCCAGAATGCTACCTACGAAACAGGTTGACTCTAAAGTCCGATGTGTATTCTTTCGGTGTTGTGCTTCTTGAGGTGTTGTGTGCGAGACCACCTTTGGATCATTCATTGGATAAGAAAAAAGTGAATTTGGTTGTTTTGTTCAAAAAATGTTACAATGAAGGTGATTCTATAACAAGTGAGTGTTTGAAATGTTACTGTCAAATGGTGCTGAGTTGTTTGGATGGTGATGGAAATCAACGAATGTCGATGAGTGATGTGGTTGGGACTTTAGAGTTTGTGATGAAATTGGTCATAAATGAGGAGGATCCTAAGTTTAATAAGACCCAAGTAAAGGAAAAAAGCGAGCAAATGTTGACGACTACTAAAGAGCAACCTATGCTATCTGCTTCTGTGTTTTCTGAGATTGGGAATCCAAGAGCAAGATAG 2472 0.3718 MENSTNKKIHTKITQLSLILLLFPLVAYSYTPDYNLAINCGSSTNNVALDKRMWIGDNIDNTNLFTFIEPKTTIPSLNISPNSLSNTQIPYTTARVSLSNFTYSFSTITNSPVFLRFHFYPTLYQNFEPSKSFFSVKVNNNLTLLKNFNPLLSIHDDDEKITKEYCIQIKPNENLNITFIPNNINRSNPYYAYINGIEVVSMPSFLYYTNLSDQDYHLKALGLDIIDYQVHNDTTLETVYRVNVGANQVSPNQDTGMFRNWDNDYPRYLKKQYPLSVSSYYGQDHLKYLKNTAPNYTAPEAVYFTARSYGKYVTEDYNVTWNFEVDSGFTYMVRLHFCEFNQLINSEGDRAFQIFIDNSFAEENADVIRWSGAPMVPVHKDYAVPMYSEGLISQIERVNLSLKLQRVPPNIYTKYRDVTLNGIEILKISDKNNNLAGLNPNKHIILSSPNQQSKSKKSTIVMVDVVGVSCLLLAFVVGILVFQTNNEGSSTLPSHLCRYFTIAEIRDATNDFEDIFIIGVGGFGNVYKGYIDGVTPVAIKRRKPGSRQGVNEFKNEIELLSQLRHIHLVSLIGYCNEDAEMILIYDFMERGTLREHLYGSDNKPLRWNQRLEILLGAARGLHYLHAGAKYNIIHRDIKSTNILLDEKLVAKVSDFGLSKVGPTGISMTHLSTMVKGSIGYLDPECYLRNRLTLKSDVYSFGVVLLEVLCARPPLDHSLDKKKVNLVVLFKKCYNEGDSITSECLKCYCQMVLSCLDGDGNQRMSMSDVVGTLEFVMKLVINEEDPKFNKTQVKEKSEQMLTTTKEQPMLSASVFSEIGNPRAR* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0399 823 SMART serkin_6 512 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0399 823 PANTHER OS07G0166700 PROTEIN 28 806 IPR045272 GO:0004714|GO:0006468
Mal3g0399 823 Pfam Malectin-like domain 38 425 IPR024788 -
Mal3g0399 823 Gene3D - 234 429 - -
Mal3g0399 823 Gene3D - 32 203 - -
Mal3g0399 823 Gene3D Transferase(Phosphotransferase) domain 1 588 799 - -
Mal3g0399 823 Gene3D Phosphorylase Kinase; domain 1 481 587 - -
Mal3g0399 823 ProSiteProfiles Protein kinase domain profile. 512 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0399 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Mal3g0399 823 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 806 - -
Mal3g0399 823 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Mal3g0399 823 SUPERFAMILY Protein kinase-like (PK-like) 485 779 IPR011009 -
Mal3g0399 823 CDD STKc_IRAK 518 773 - -
Mal3g0399 823 Pfam Protein tyrosine and serine/threonine kinase 518 771 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0399 Mal-Chr3 15103722 15106277 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0399 19 823 Receptor kinase-like Gene Family AT5G39000 42.282 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mal3g0399 Malectin_like 3.2e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0399 - - mtr:MTR_7g015420 1223.76