Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0386 ATGTTCTTGTTCCCTCTAGTTGCTAATTCATACAACCCTGATTACAATTTAGCTATCAATTGTGGCTCCTTGACAAACACTACTGCCTTAGATAATCGAACTTGGGTTGGTGATAATATTCATAACACAAAACTCTTTTCTTTCATTGAACCAAAAACCATCACAAGCCATTCTCTTAAAACCAAAGCTAATTCCCTCTCAAATACCCAAATTCCATACACAACCGCACGTGTGTCTCTCTCAATTTTCACATACTCATTTTCTAGCATTACCAATTCCACTATTTTTCTTCGCCTTCATTTTAACCCAACATCGTATCAAAATTTTGAACCCTCAAATGCACTTTTCTCTGTTGAAGTAAACAACAAGCTTATCCTTCTTAAAAACTTCAACCCTTCTCTTTGGCTTCATGATGATGAGAATCATATCATGAAAGAATATTGCATCCAAATCAAACCAAATGAGAACCTAAACATCACTTTCATTCCCAACAACATAAACCAATCAAATGTTAATTATGCTTTCATTAACGGAATTGAAGTCGTGTCTATGCCTTCTTTTCTCTATTACACAAACCTTGATGTCGCAAATTCTGAGTTCAAATCACTTGACTCAGACTACAAAGCTCTGGAGACGGTTTATAGCGTCAATGTTGGTCAAAATCAAGTTCCACCAAACTTAGATACAGGTTTGTTTCGTAATTGGGACAGTGATTATCCTCGTTACTTAGATAAACAATATCCACTAGGTGTATCAAGTTATTATTTTGGATATGTTGATCTCAACTATAAAAACAATACCATTCCAAAATTACATTTTTGTGAATTTGATCCGAAGATCAAGAATAAAGGTGATAGAGTTTTTCAGATATTTATACATGATATTTTGGCTGAACCAAATGCTGATGTGATTTCTTGGAGTGGTGCTCGTATGGTTCCATTTCATAAGGATTATGTTGTGACTATGCACTCTGAAGAAGGAAGCTCTCAAATTGAAAGAGTTAATCTTTCAATCAAACTACAACGAGCACCAGAACGCATCCACACAAAATATCGTGATGCATCACAGTTTTTTGGCAATGTATACAAAGGTTGCATTGATAGATCCACACCAGTTGCGATAAAACGCCTCAAATCAGGCTCTCAACAAGGTGCCAACGAGTTCATGAACGAGATCGAGTTGCTCTCCCAACTTCGCCACATTCACTTGGTGTCCCTCGTGGGATATTGCAACGATGACACTGAGATGATTCTGGTTTATGAGTTCATGCAGCACGGTACTCTTTGCGAGTATCTTTATGGTTCTAATAACCAGCCCCTACCGTGGAAGCAGAGGCTTGAGATTCTTTTGGATCCTGAGTACTATATGTTCCAAAGGCTTACTCTGAAATCTGATGTGTACTCATTTGGTGTGGTGCTTCTTGAGGTGTTGTGTGCTAGACCACCTTTGGTTCGTGATTTGGACAAGAATACAGCTAGTCTAGTTTGTTGGTTTCAGAAATGTTACGATGAAGGTGTGGCAATTGAACAAATAGTGGATCCATTCCTAAGGGATTCTATCACATGTGAGTGTTTGGAATATTATTGCAAGTTGGCGTTAAGTTGTTTGCTTGATGATGGGACTCAACGACCTTCAATGAGTCAAGTGGTTGGGGGATTAGAGTATTTGTTGCGGTTGGTGGTGAGTGAGGAAGATAGCGAGGTTGGTACGACCCAAAAAGATAGGACATTTATGAAAGGTCTAGAGTTCTCGCAATTCATGAGTGATGAAGGGAGTGGCCTGCATTTCACAAGATCCCATACTTACAAGGAAATTACAGTCTCAGCAAGGTCAAGTAGTCAAGAACATCCTTTCTATGAGATTGGAAATCAAAGAACACGGTCATATTCATGTCAAAACTTCAAAATTCATATTTAG 1917 0.3824 MFLFPLVANSYNPDYNLAINCGSLTNTTALDNRTWVGDNIHNTKLFSFIEPKTITSHSLKTKANSLSNTQIPYTTARVSLSIFTYSFSSITNSTIFLRLHFNPTSYQNFEPSNALFSVEVNNKLILLKNFNPSLWLHDDENHIMKEYCIQIKPNENLNITFIPNNINQSNVNYAFINGIEVVSMPSFLYYTNLDVANSEFKSLDSDYKALETVYSVNVGQNQVPPNLDTGLFRNWDSDYPRYLDKQYPLGVSSYYFGYVDLNYKNNTIPKLHFCEFDPKIKNKGDRVFQIFIHDILAEPNADVISWSGARMVPFHKDYVVTMHSEEGSSQIERVNLSIKLQRAPERIHTKYRDASQFFGNVYKGCIDRSTPVAIKRLKSGSQQGANEFMNEIELLSQLRHIHLVSLVGYCNDDTEMILVYEFMQHGTLCEYLYGSNNQPLPWKQRLEILLDPEYYMFQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKNTASLVCWFQKCYDEGVAIEQIVDPFLRDSITCECLEYYCKLALSCLLDDGTQRPSMSQVVGGLEYLLRLVVSEEDSEVGTTQKDRTFMKGLEFSQFMSDEGSGLHFTRSHTYKEITVSARSSSQEHPFYEIGNQRTRSYSCQNFKIHI* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0386 638 SUPERFAMILY Protein kinase-like (PK-like) 358 551 IPR011009 -
Mal3g0386 638 Gene3D Transferase(Phosphotransferase) domain 1 346 450 - -
Mal3g0386 638 Pfam Protein tyrosine and serine/threonine kinase 452 550 IPR001245 GO:0004672|GO:0006468
Mal3g0386 638 Pfam Protein tyrosine and serine/threonine kinase 357 449 IPR001245 GO:0004672|GO:0006468
Mal3g0386 638 PANTHER OS07G0166700 PROTEIN 449 617 IPR045272 GO:0004714|GO:0006468
Mal3g0386 638 Gene3D - 258 345 - -
Mal3g0386 638 Gene3D - 13 185 - -
Mal3g0386 638 ProSiteProfiles Protein kinase domain profile. 347 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0386 638 PANTHER OS07G0166700 PROTEIN 9 354 IPR045272 GO:0004714|GO:0006468
Mal3g0386 638 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 358 451 - -
Mal3g0386 638 Pfam Malectin-like domain 19 238 IPR024788 -
Mal3g0386 638 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 449 617 - -
Mal3g0386 638 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 9 354 - -
Mal3g0386 638 PANTHER OS07G0166700 PROTEIN 358 451 IPR045272 GO:0004714|GO:0006468
Mal3g0386 638 Gene3D Transferase(Phosphotransferase) domain 1 451 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0386 Mal-Chr3 14616049 14618469 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0386 450 569 Receptor kinase-like Gene Family AT3G51550 50.833 3.74e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mal3g0386 Malectin_like 7.7e-13 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0386 - - mtr:MTR_7g015420 478.404