LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g0377	ATGTCTGGAAAGGGTGTGAAATCTATTAAGGATGAAAAGCAAGAATTGCAGAAGCAAATTGGGTGCATCACTGGATTTTTTAAGCTCTTTTATCGCCAGCGTTTAATCACAGGCCAACGCACTGATAGATACATTCAGAATGCATCTTCTTCAGGTGTAACCAATAATGGCATCAAAGAGCAGAATAGTGCAATGCAGAAACCAAAGACAAAGAATCAAAAGATTGCAAGAGAGAAACAACAATTCTCTACAGAATCATCAAAAACATCTGTGTCATCATCATCTTGTTCATCTAGCATTTCATCCCATGAATTCAACAGAATAATCAAGATAGAATCATTATCATCAAACAAACAAATTCAAGTTCCAAAAAATCCACATTCAAAAGTATCAACAAAGCAACATCATGCACAAAACCAACAATCACTTGATTTCTATGATATTATCAAAGATTCAATGCATAGAGAAGGTAAGGGATTGTATGTGAAAACATTAACCAAACAAGAAAAAAGGGGTCATGGTTATGCATTGAATCAACACATAGACTCTCCAAGGCCTATTATAGTTTCCAAGGAACCATTACATACTCTTTCGAAGTCGAAAAAAGCACATTGGGACTCTCCGCGACTCTCGTATGATGCATTGAAATCCACTACAAGGTATAAGGAGCTTCCTAGGCTTTCCTTGGACAGCAAGCAAGGATCCATTAGAGGGATCGACGGAGGAAACAAGGCTCGCAACGTGTCTAATGGTTCGCAAAGAGGGTATGAGAGGAACTCAAGCACAATGCTTAACCAAATTCAAGAACCAGAAACATCGAAAAGATCGTCCAGTGTTGTAGCTAAGTTGATGGGACTAGAAGCTCTCTCGGACTCGACACAAACTTGTAGGACTTCTAGCTGCTCTACCGATAAAAAAGAGATCGTAGCAAGAACTAGCACATGCGACGAATACAAGAAACAACAAAGTTCAGCATCCCCGAGGAATAGAAGGGTTGATGATTCAATCACAAATGTGAACCCAAACTCACGATTTGCGCTAGAATCGTCTCCATGGAGGCAACCTGATGCAAGGCAAAATTCTTTGTCACAAGATTCTTCAAAGGGAAGTGATTCTGATATAAAAGAATCAAAGCCTTCTCTTTCTGTATATGGTGAAATTGAGAAAAGGCTCGCAGAACTCGAGTTCAAAAAGTCTGGAAAAGATCTCAGAGCCCTTAAACAGATTCTTGAAGCTATGAAGAGATTTACAGATTCATCACCTGACACTAGGAATACTAATACTAGTCTCAGTGAAAGTTTTGAAGTACAAAGTCCAAGAATACAACAAAAGGACTCACCCTCGGCAACTGTCGCAGTTGAGATGTCGAATTCAATAAAGGGTAGTAAATTGCCAATTATCATCACGAAACCAACAAAAGAAACTAAAACAGTCAATAGTCCTCCAAAAAAATTGTCAATTCATGATAAATCTTGTATCGGAAAATCTTCTCCAACAAATGGAAGATTGGTTGATAAGCAAAAATCTTGCTCAAAAACAAAAAATACCAAGGAACCTTTTGGTCAACAAGTTCCTTCAGCAGACAAGAATAATTACTTCAGAACATCAAAATTGATGCAATCATCAAAATCTCCTCAAGACAGCAATGGAAAAAACACTACAACTAGTCCAAGACGACCGAAGAAGTTCGGAGTCGAGAGGTGTTCTCCACCAACTAGTCCATCATCAGATTTTGTGATTAACAGAAGACAACATAATGAGCAACTTGTGGAGTTGTCTACTTCTTCGAGTTCAACATCAACACAAAGCTTCTCTATTTTGCAGGAAAAAAATGAACATTTTAGTCAGATGAATTCTCATGGGAGGAAATTTAAGCATCATGTTAATGTCATTTCTTCGGATTTTGGCAGCAACAGAAGCTTGGCCACTCAAAGTGACATAGAAGAAATTCGGCTCGATCAATCGAATACATTTGAAGAGTCGAGGAAGGAAAACTCTAAGGCTGCTATAGTTGTGACTACTGAGCAGCCAAGTCCTGTATCTGTTCTTGATGCTGCATTCTATAAGGAAGATCCTCCATCTCCAGTGAAAACGAAATCGAACGTCTCAAAAAATTTAGGTGAAGCTCTTAGCACTGATGATGATAGTGAGGAGAACTCAATGGCTCAAATTCTGCAAGAAATTGATTGGACTGATGAAAAACTCATCAATGTCAATAACATCAAGAATCCTGATCACAAGTATATATCAGAAATACTAATAGCATCAGGTCTAGTCAGTGATCGAAACTCTAACCAGATACTTCATTCTTCAGGTCACTTGATTAACCCGAAATTATTCTTTGCACTCGAACAAATGAAGACAAATAAGTCGCATTTCAATATCGAAGACAATGTGAAGAAAATTTCCAGGGCTATTATTAGTCCTGAGAATGTGAAAAGAAAACTCATATTTGATGTTGTTAATGACATTTTGGTTAAAAAACTGATGTATGAGAGTTCTTCTAGTTTGTGTTTCCTACCAAATGGGCTAAAAGGGAAACAATTTTTTGAAGAGATATGTACAGAAATTGATGAGTTACAACCTGAAAAGAGGAATGTGAGCTTTGTTCATGAGGATGGGAATTTGATAAGTCTTTTGTGCAGAGATTTGAAGGATCACAACACAATTTGGACTAACTGTTGCAGTGAGATACCGAATATGGTGTTGGATATCGAACGGTTGATCTTTAAAGATTTGATAACTGAAGTTTGTGAAGATGAACTACAAAACAATTTTGGTGGTCATTGCAGGAAAATGCTGTTTCCTAAGTAG	2814	0.376	MSGKGVKSIKDEKQELQKQIGCITGFFKLFYRQRLITGQRTDRYIQNASSSGVTNNGIKEQNSAMQKPKTKNQKIAREKQQFSTESSKTSVSSSSCSSSISSHEFNRIIKIESLSSNKQIQVPKNPHSKVSTKQHHAQNQQSLDFYDIIKDSMHREGKGLYVKTLTKQEKRGHGYALNQHIDSPRPIIVSKEPLHTLSKSKKAHWDSPRLSYDALKSTTRYKELPRLSLDSKQGSIRGIDGGNKARNVSNGSQRGYERNSSTMLNQIQEPETSKRSSSVVAKLMGLEALSDSTQTCRTSSCSTDKKEIVARTSTCDEYKKQQSSASPRNRRVDDSITNVNPNSRFALESSPWRQPDARQNSLSQDSSKGSDSDIKESKPSLSVYGEIEKRLAELEFKKSGKDLRALKQILEAMKRFTDSSPDTRNTNTSLSESFEVQSPRIQQKDSPSATVAVEMSNSIKGSKLPIIITKPTKETKTVNSPPKKLSIHDKSCIGKSSPTNGRLVDKQKSCSKTKNTKEPFGQQVPSADKNNYFRTSKLMQSSKSPQDSNGKNTTTSPRRPKKFGVERCSPPTSPSSDFVINRRQHNEQLVELSTSSSSTSTQSFSILQEKNEHFSQMNSHGRKFKHHVNVISSDFGSNRSLATQSDIEEIRLDQSNTFEESRKENSKAAIVVTTEQPSPVSVLDAAFYKEDPPSPVKTKSNVSKNLGEALSTDDDSEENSMAQILQEIDWTDEKLINVNNIKNPDHKYISEILIASGLVSDRNSNQILHSSGHLINPKLFFALEQMKTNKSHFNIEDNVKKISRAIISPENVKRKLIFDVVNDILVKKLMYESSSSLCFLPNGLKGKQFFEEICTEIDELQPEKRNVSFVHEDGNLISLLCRDLKDHNTIWTNCCSEIPNMVLDIERLIFKDLITEVCEDELQNNFGGHCRKMLFPK*	938

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	419	448	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	245	276	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	79	99	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	328	368	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	417	448	-	-
	Mal3g0377	937	Pfam	Domain of unknown function (DUF4378)	745	916	IPR025486	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	314	379	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	232	276	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	48	99	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	472	581	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	692	718	-	-
	Mal3g0377	937	PANTHER	LONGIFOLIA PROTEIN	1	720	-	-
	Mal3g0377	937	PANTHER	LONGIFOLIA PROTEIN	1	720	IPR033334	GO:0051513
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	48	70	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	492	506	-	-
	Mal3g0377	937	PANTHER	LONGIFOLIA PROTEIN	721	936	IPR033334	GO:0051513
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	514	559	-	-
	Mal3g0377	937	MobiDBLite	consensus disorder prediction	116	139	-	-
	Mal3g0377	937	PANTHER	LONGIFOLIA PROTEIN	721	936	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g0377	Mal-Chr3	14405774	14411425	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g0377	143	935	TRM (TON1 Recruiting Motif) Superfamily	AT1G74160	30.164	7.63e-73	256

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g0377	-		-	cam:101511032	1025.77