Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0375 ATGGATAAGAATTCAAGAGAAGATGAATTTGCATTGAAACAAGAGGTTCGTCATAATTCAAATGAACATCATGAAAAGGAAAAGGCTTCACCATCCTCAAGCTCCTTAGCTTCATCATCACAATGGCCAAGATTGAAAGATCCAAGAATTGTTAGAGTATCAAGAGCTTTTGGTGGAAAAGATAGACATAGCAAAGTTTGCACAATAAGAGGATTAAGAGATAGAAGAGTAAGGCTTTCAGTTCCAACAGCTATTGAACTTTATGATCTTCAAGATAGGTTAGGGCTTAATCAACCTAGTAAAGTTGTTGATTGGTTGCTTAATGCAGCTAAACATGAAATTGATCAACTTCCACCATTACCTAACTTTCCACCTCTAGGAACAAATTTCAACTTTGGTTTTCCATCTTCTAATGAAACCAACATCAACAATCAACAATTGTTGAATATCAATAGGAACAATATTCATTGGGAAGGTTCATCTTCAAGTCAAAATTCTTCTTGGAAATCAAACCCTAAAGAAGTTTCAAGAGAATTGGTTAGTGAAAAACCAAATTATTTGATGAATAGAACTCAAGAAGAGGAAAATATTAACAACAAGCAAGGAAGCACTATTGAAGTTCCTAGTGCAATTGTTTTTCCAAATAACAACAATTTGTTACAAAGACCAAATCACCCTTCATTTCTTGGTTTATTAAATACTATGCCACTTGGTACTAATTACCAATGGGGAGGAACTTCCAATGATGTTGTTAATTCTTCTCAATTGGGAAACAATGGTTTTATTACCTCTTTGCCACCAATGTTGTCTCTATCCACTGGAAATTCTTCTCAAATGTTGTTAGGAGCAACACAATCATATTTCTCTTCAAATGTTAATGCAATGGAGATGGATCATCATCAAAGACAAATCAACAACCATCATTATCATCATCAAATGTTGAGTTCATCAAGTTCTTCTCAGAATCCAGTGACAAATTCTCTCAACAATCCATCCTTTAGTTTGGCCAAATTTCTCCAAAACAACAGAGAAAATTCATCCAATAAAGAACAAGATTTCACTTCAAAGTGA 1071 0.3399 MDKNSREDEFALKQEVRHNSNEHHEKEKASPSSSSLASSSQWPRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIELYDLQDRLGLNQPSKVVDWLLNAAKHEIDQLPPLPNFPPLGTNFNFGFPSSNETNINNQQLLNINRNNIHWEGSSSSQNSSWKSNPKEVSRELVSEKPNYLMNRTQEEENINNKQGSTIEVPSAIVFPNNNNLLQRPNHPSFLGLLNTMPLGTNYQWGGTSNDVVNSSQLGNNGFITSLPPMLSLSTGNSSQMLLGATQSYFSSNVNAMEMDHHQRQINNHHYHHQMLSSSSSSQNPVTNSLNNPSFSLAKFLQNNRENSSNKEQDFTSK* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0375 356 MobiDBLite consensus disorder prediction 1 30 - -
Mal3g0375 356 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 349 IPR005333 GO:0003700
Mal3g0375 356 Pfam TCP family transcription factor 59 193 IPR017887 -
Mal3g0375 356 MobiDBLite consensus disorder prediction 1 43 - -
Mal3g0375 356 PANTHER TRANSCRIPTION FACTOR TCP2-LIKE 1 349 - -
Mal3g0375 356 MobiDBLite consensus disorder prediction 159 181 - -
Mal3g0375 356 MobiDBLite consensus disorder prediction 311 331 - -
Mal3g0375 356 ProSiteProfiles TCP domain profile. 59 117 IPR017887 -
Mal3g0375 356 MobiDBLite consensus disorder prediction 159 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0375 Mal-Chr3 14258466 14259536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0375 42 131 TCP Transcription Factor Family AT3G02150 78.889 1.94e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Mal3g0375 TCP 4.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0375 - - var:108327895 323.939