Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0358 ATGGCTTCTTCAATAAATGGCCGTAAAGCAAGTGAGATTTTCAAAGCACAAGCTTTATTATACAAACACATGTATGGCTTCTTAGATTCCATGTCTCTTAAATGGTCAATTGAGATGAACATACCAAATATTATCCACAATCATGGAAAACCAATTACTCTTTCAAACTTAGTTTCAATTCTTCAAGTTCCATCAACCAAAATCGATTACGTGCAGCGTCTCATGCGTTACCTTGCATGCAATGGATTCTTTGAGATAGTAACAAATCAAGAATTAGAAAATGAAGAAGAAGCTTATGGTCTCACAGTTACTTCAGAGCTTCTAGTTAAAGGCACTGAAAAGTGTTTAGCACCAATGGTGGAGTGTGTTCTTAATCCAACATTTTCAAATTCATTTCATAATTTGAAGAAGTGGATTTATGAGGAAGATCTCTCTCTTTTTGCTGTCTCTTTAGGTTCTGATATTTGGGAATTTCTTAATCAAAACCCTGGATATAATAGAATGTTCAATGATGCAATGGCTAGTGATTCCAAAATGATAAATTTGGCGTTGAAAGATTGCAATTTTGTGTTTGAAGGGTTGGAATCAATTGTGGATGTTGGTGGTGGAAATGGAACAACTGGTAAGATTATTTGTGAGATATTTCCTAAGTTGAAATGTGTTGTTTTTGATCGTCCAAAGGTTGTAGAGAATTTATGTGGAAGTAATAATTTGATATATGTTGGTGGAGACATGTTCACATCTATTCCTAAAGCTGATGCTGTTCTCCTCAAGACAAAACTCTAA 786 0.3448 MASSINGRKASEIFKAQALLYKHMYGFLDSMSLKWSIEMNIPNIIHNHGKPITLSNLVSILQVPSTKIDYVQRLMRYLACNGFFEIVTNQELENEEEAYGLTVTSELLVKGTEKCLAPMVECVLNPTFSNSFHNLKKWIYEEDLSLFAVSLGSDIWEFLNQNPGYNRMFNDAMASDSKMINLALKDCNFVFEGLESIVDVGGGNGTTGKIICEIFPKLKCVVFDRPKVVENLCGSNNLIYVGGDMFTSIPKADAVLLKTKL* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0358 261 PANTHER O-METHYLTRANSFERASE 2 259 IPR016461 GO:0008168
Mal3g0358 261 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Mal3g0358 261 Pfam O-methyltransferase domain 132 259 IPR001077 GO:0008171
Mal3g0358 261 SUPERFAMILY "Winged helix" DNA-binding domain 11 111 IPR036390 -
Mal3g0358 261 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 257 IPR029063 -
Mal3g0358 261 Gene3D - 1 108 IPR036388 -
Mal3g0358 261 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 261 IPR016461 GO:0008168
Mal3g0358 261 Gene3D Vaccinia Virus protein VP39 109 261 IPR029063 -
Mal3g0358 261 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0358 Mal-Chr3 13575714 13576639 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0358 31 258 Monolignol Biosynthesis Gene Families AT5G54160 30.769 2.31e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0358 K22588 - ag:AAC49926 414.461