LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal3g0338	ATGGAACAAAGAAAAAATATCTTTGTTCATGTAGTGATTTTTTTGCTCATGGTCCTACTTAGAGGAAAAAATGTTGTTGAAGCAAAAGGAGAAGATGAAGAAAAAGATAGGATTTTTGAGCTTCCTGGTCAACCTAAGGTTTTGTTTAAGCAATTTTCTGGCTATGTAACTGTTAATCATGTTGCTGGTAGAGCTCTCTTTTATTGGTTAACTGAAGCTGAACAAAATCCTCTCAACAAACCACTTGTCATTTGGCTTAATGGAGGTCCAGGTTGTTCATCAGTGGCATATGGAGCATCTGAAGAAATTGGCCCATTTAGATTAAACAAAACAGCTTCTGGGCTTTACATTAACAAGTTTGCATGGAACACAGTGGCCAACCTTTTATTCTTGGAAGCTCCGGCCGGCGTCGGCTTCTCCTATAGCAACCGCTCTTCCGACCTCCTTGACACCGGCGACCGCCGCACTGCCAAGGACTCTCTAGAATTTGTAATCCAGTGGCTAGAAAGATTCCCACGTTACAAGAATAGGGAACTTTATATAACAGGAGAGAGTTACGCAGGACATTATGTCCCTCAATTAGCAAAGGAAATTATGACCTATAACATTAAAGCCAAGCAACACATCAATCTCAAGGGAATAATGGTTGGGAATGCAGTGACAGACAACTATTATGATAACTTGGGCACAGTGACGTACTGGTGGAGCCATGCTATGATCTCTGATCAAACATACAAACAACTCATAAGCACTTGTGATTTTCACCATCAGAAAGAATCCGATGAATGTGAATCTCTATATAGCTATGCCATGGATAAAGAATTTGGTAACATTGATCAGTACAATATCTATGCTCCTCCATGTAACAATTCCGATGGCAGCTCGTCCGGTACCCGTGGTACTATTCGGTTGCCCCACCTTCCTCATGTGGCTTTTAGGCAAATGGCTGGTTATGATCCATGTACAGAAAAATATGCAGAAGTTTACTACAATAGGCCAGATGTTCAAAAAGCACTTCATGCTAACACAACTGGCATTCCTTATAAGTGGACTGCTTGCAGTGAAGTTTTGAATAGAAATTGGAATGATACAGATGTTTCTGTTCTTCCACTTTATAGAGAATTGATAGCTCATGGTGTAAGAGTTTGGGTTTTCAGTGGAGATGTAGACTCAGTGGTTCCAGTTACAGCAACAAGATATGCCCTTGCACAGCTTAAGTTGGCTACTAAAATACCATGGTATCCTTGGTATGTCAAAAAGCAGGTTGGAGGTTGGACAGAGGTGTATGAAGGACTAACATTTGCCACAGTGAGAGGAGCAGGACATGAAGTTCCACTATTCAAACCTAGAGCAGCTCTTCAGTTATTCAAATCATTCCTTGCAGGAAAGCCTCTTCCAAAAGTCCTAAAATAG	1413	0.4091	MEQRKNIFVHVVIFLLMVLLRGKNVVEAKGEDEEKDRIFELPGQPKVLFKQFSGYVTVNHVAGRALFYWLTEAEQNPLNKPLVIWLNGGPGCSSVAYGASEEIGPFRLNKTASGLYINKFAWNTVANLLFLEAPAGVGFSYSNRSSDLLDTGDRRTAKDSLEFVIQWLERFPRYKNRELYITGESYAGHYVPQLAKEIMTYNIKAKQHINLKGIMVGNAVTDNYYDNLGTVTYWWSHAMISDQTYKQLISTCDFHHQKESDECESLYSYAMDKEFGNIDQYNIYAPPCNNSDGSSSGTRGTIRLPHLPHVAFRQMAGYDPCTEKYAEVYYNRPDVQKALHANTTGIPYKWTACSEVLNRNWNDTDVSVLPLYRELIAHGVRVWVFSGDVDSVVPVTATRYALAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFLAGKPLPKVLK*	471

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal3g0338	470	Gene3D	-	368	462	-	-
	Mal3g0338	470	SUPERFAMILY	alpha/beta-Hydrolases	34	466	IPR029058	-
	Mal3g0338	470	ProSitePatterns	Serine carboxypeptidases, histidine active site.	432	449	IPR033124	GO:0004185
	Mal3g0338	470	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	11	467	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	PRINTS	Carboxypeptidase C serine protease (S10) family signature	432	445	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	PRINTS	Carboxypeptidase C serine protease (S10) family signature	118	130	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	PRINTS	Carboxypeptidase C serine protease (S10) family signature	131	141	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	PRINTS	Carboxypeptidase C serine protease (S10) family signature	167	192	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	ProSitePatterns	Serine carboxypeptidases, serine active site.	181	188	IPR018202	GO:0004185
	Mal3g0338	470	Gene3D	alpha/beta hydrolase	32	290	IPR029058	-
	Mal3g0338	470	Gene3D	-	321	358	-	-
	Mal3g0338	470	Pfam	Serine carboxypeptidase	45	461	IPR001563	GO:0004185\|GO:0006508
	Mal3g0338	470	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 25	11	467	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal3g0338	Mal-Chr3	11986308	11998460	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal3g0338	326	465	Calmodulin-binding Proteins	AT2G22960	30.496	7.91e-16	73.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal3g0338	K16297		-	gmx:100807680	852.047