Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0335 ATGGCGTTCTTTGGTAAAATGGGAAAGTTACTCAAGAGTTCTGCAGTCAAGCACATCAATCATGATTTATCTATGTCTACTCCTCTGGCATTCCAAGCAATTAGATTCATGTCATCTGCAAAGCTTTATGTTGGAGGTATTTCGTATAGCACTGATGATATGAGTCTCCGAGAAAGTTTTGCTCCCTATGGAGAAGTACTTGATGCAAAGGTTATTATGGACCGCGAACAAGGCAGGTCCAAAGGTTTTGGCTTCGTAACTTTTGCAACGAGCGAGGAAGCATCTTCTGCCCTTCAGGCCATGGATAACAAGGAACTTCATGGCCGGACAGTACGAGTGAACTATGCTACAGAAAGGCCGCGTTCTGGGTTTGGTGGTGGTGGTGGCTATGGGGGAGGCGGCGGTGGTGGTTATGGTGGAGGCGGTGGTGGCTATGGTGGAGGAGGCGGTGGCTATGGTGGAGGCGGTTACTGA 474 0.4873 MAFFGKMGKLLKSSAVKHINHDLSMSTPLAFQAIRFMSSAKLYVGGISYSTDDMSLRESFAPYGEVLDAKVIMDREQGRSKGFGFVTFATSEEASSALQAMDNKELHGRTVRVNYATERPRSGFGGGGGYGGGGGGGYGGGGGGYGGGGGGYGGGGY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0335 157 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3 MITOCHONDRIAL 1 157 - -
Mal3g0335 157 SUPERFAMILY RNA-binding domain, RBD 25 150 IPR035979 GO:0003676
Mal3g0335 157 CDD RRM_HP0827_like 41 116 - -
Mal3g0335 157 Gene3D - 32 154 IPR012677 -
Mal3g0335 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 1 157 - -
Mal3g0335 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Mal3g0335 157 SMART rrm1_1 41 114 IPR000504 GO:0003723
Mal3g0335 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0335 Mal-Chr3 11898524 11900611 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0335 33 120 C2H2 Transcription Factor Family AT2G19380 36.364 1.32e-13 65.5