Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0331 ATGTGGAAGATTTTTCTTCTTACTTTGGGTATGATCATGGGGACTCAGTTTGCCATAGTGACATCTCAACTTCAAATGGAAGCAAATGCTATACTAAATAGTGGATGGTGGAATACATCTTATGCACACTTCAATATCTCAAATCGTTGTAGTTGGTCCAGTATATCTTGCAACGAGGCTGGAAGCATAAAAGAAATCAATATATATTTTGCAACAAGGACATGGGTGATTCAATTTGGAAAACTCAACATATCTGTTTTCCACAATTTAGAAAAACTTGCTCTCATTGGAATTGGTCTACAAGGGACTATCCCAGAAGAAATTGGTCTTCTATCAAAACTCACATATCTCAATTTGCATAGCAATTCTCTTGTAGGTGAGTTACCTCCTTCCTTAGGAAATCTTAAAAGATTAGAGTACTTTGATATATCTTTTAACAATATTCAAGGTTCCATTCCTTCTTCACTAGGAAATCTCATACAACTAGAGTACTTGTACATCTCTAACAACTACATTCAAGGTTCCATTCCTCTTGAGTTGGGGTTCTTGAATAATCTCCAAAAATTAGATTTATCTCATAACCGACTTAGTAAAAACTTGCCTATTTTCCTTACAAATCTCACACAATTACAATACATTGACATCTCTAGCAATTTTCTCACTGGTTCCCTCCCATCTAGTTTCGACCAATTAACCAAACTGCAAACATTGCGGTTAAATAACAACTCCTTCAGTGGCACCTTTCCTATTTCGGTGAAAAATCTCTCTCAACTAGAAACCCTTGACATTTCCCACAATTTACTTAATGGTACGCTTCGTTCCAATTTGTTTCCATTGAAAGATTATGGAACTTCCATCGACCTTAGTCACAACCTAATTAGTGGCGAAATCCCTTCTCAATTTGGACATTTTTACAAACTTAATTTAAGCAATAATAATTTCAGTGGAATGGTACCTCAATCTCTATGTAATGTCTTTTATGTGGACATTTCCTACAATTGTTTGAAGAGTCCCATTCCAGACTGTACTTATCTTAATCCAAGGAACACAAGGAACAAGGATGTATGTATCAACACTTCACATGACCAATTGCAACCTGATTCATCTCACAAGAAAAATAATAAAGTAAAGCGTAATATTGTCATTGTTCTTCCTATCCTTATTTTTCTAATCATAGCCTTCTCACTTCTCATGTACTTCAAACGTCGTCATAATCCTATCGAGAACAAGCATAGAAACACAGAGGCAATGAAGAATGATGATTTTTGTATATGGAATTATGATGGCAAACTAGCATACAATGACATCATTAGAGCAACAAAAGACTTTGACATTAGATATTGTATAGGGAAAGGAGCATATGGAAGTGTTTACAAGGCACAATTACCAAGTGGTAAATTTGTTGCATTAAAAAAACTTCACAGCTATGAAGCTGAGGTGCCAGCTTTTGATGAAAGTTTTAGAAATGAAGTGAAAATTTTATCAGAAATAAAGCATAGACATATTGTGAAGCTTTATGGATTCTGTTTGCATAGAAGAATTATGTTTTTGATATATCAGTATATGGAAAGAGGAAGCTTGTTTTCTGTCTTGCATGATGATGTAGAAGCCATGAAATTCAATTGGAGAAAAAGGCTTAACACCGTTAAAGGAGTTGCATCTGCTCTATCATATCTTCATCATGATTTCACCTCTCCAATAGTGCATAGAGATGTATCTACTAGCAATATCTTGCTAAACTCGGAATGGCAGCCTAGTGTTTCTGACTTTGGCATAGCTCGACTCCTTCAATATGATTCATCCAATCGAACAATAGTTGGTGGAACAATTGGATATATAGCTCCTGAGCTTGCCTATACTATGGTTGTAAGTGAAAAGTGTGATGTATATAGTTTTGGAGTAGTGGCACTTGAAATTTTAATGGGAAGACATCCGGAGGAAATATCGTCATCACTTCAACTAACATCAACTCAAGACATCAAATTTTTTGAAGTACTAGACCAACGTCTCCCACTTCCAAATGATGTGATAGTTTTACTTCAAATAATTCATGTTGCTGCAGTAGCATTTGCATGCTTAAATCAAAATCCTTCCTCTCGACCAACAATGAAATGTGTGTCACAAAGTTTTTCCACTCAGCTTTCACAATTAAGCGTTCCTTTGAGTGAAATTTCAGTGCAACAACTCATGAGTCAAGAACTCAAAGCATTATTTCATATTGTGAACCCTAAGCTAAACTTTGAAATTAATTAA 2253 0.352 MWKIFLLTLGMIMGTQFAIVTSQLQMEANAILNSGWWNTSYAHFNISNRCSWSSISCNEAGSIKEINIYFATRTWVIQFGKLNISVFHNLEKLALIGIGLQGTIPEEIGLLSKLTYLNLHSNSLVGELPPSLGNLKRLEYFDISFNNIQGSIPSSLGNLIQLEYLYISNNYIQGSIPLELGFLNNLQKLDLSHNRLSKNLPIFLTNLTQLQYIDISSNFLTGSLPSSFDQLTKLQTLRLNNNSFSGTFPISVKNLSQLETLDISHNLLNGTLRSNLFPLKDYGTSIDLSHNLISGEIPSQFGHFYKLNLSNNNFSGMVPQSLCNVFYVDISYNCLKSPIPDCTYLNPRNTRNKDVCINTSHDQLQPDSSHKKNNKVKRNIVIVLPILIFLIIAFSLLMYFKRRHNPIENKHRNTEAMKNDDFCIWNYDGKLAYNDIIRATKDFDIRYCIGKGAYGSVYKAQLPSGKFVALKKLHSYEAEVPAFDESFRNEVKILSEIKHRHIVKLYGFCLHRRIMFLIYQYMERGSLFSVLHDDVEAMKFNWRKRLNTVKGVASALSYLHHDFTSPIVHRDVSTSNILLNSEWQPSVSDFGIARLLQYDSSNRTIVGGTIGYIAPELAYTMVVSEKCDVYSFGVVALEILMGRHPEEISSSLQLTSTQDIKFFEVLDQRLPLPNDVIVLLQIIHVAAVAFACLNQNPSSRPTMKCVSQSFSTQLSQLSVPLSEISVQQLMSQELKALFHIVNPKLNFEIN* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0331 750 Pfam Leucine Rich Repeat 113 135 IPR001611 GO:0005515
Mal3g0331 750 Pfam Leucine Rich Repeat 209 231 IPR001611 GO:0005515
Mal3g0331 750 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524
Mal3g0331 750 ProSiteProfiles Leucine-rich repeat profile. 185 208 IPR001611 GO:0005515
Mal3g0331 750 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Mal3g0331 750 SUPERFAMILY Protein kinase-like (PK-like) 430 708 IPR011009 -
Mal3g0331 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 567 579 IPR008266 GO:0004672|GO:0006468
Mal3g0331 750 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 130 736 - -
Mal3g0331 750 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 20 147 - -
Mal3g0331 750 SMART LRR_sd22_2 135 161 - -
Mal3g0331 750 SMART LRR_sd22_2 183 202 - -
Mal3g0331 750 SMART LRR_sd22_2 207 233 - -
Mal3g0331 750 SMART LRR_sd22_2 255 278 - -
Mal3g0331 750 SUPERFAMILY L domain-like 42 346 - -
Mal3g0331 750 PRINTS Leucine-rich repeat signature 186 199 - -
Mal3g0331 750 PRINTS Leucine-rich repeat signature 255 268 - -
Mal3g0331 750 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 130 736 - -
Mal3g0331 750 Gene3D Ribonuclease Inhibitor 19 175 IPR032675 -
Mal3g0331 750 Gene3D Ribonuclease Inhibitor 176 280 IPR032675 -
Mal3g0331 750 Gene3D Ribonuclease Inhibitor 281 363 IPR032675 -
Mal3g0331 750 Pfam Protein kinase domain 448 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0331 750 Gene3D Phosphorylase Kinase; domain 1 404 521 - -
Mal3g0331 750 SMART LRR_typ_2 111 135 IPR003591 -
Mal3g0331 750 SMART LRR_typ_2 207 230 IPR003591 -
Mal3g0331 750 SMART LRR_typ_2 183 205 IPR003591 -
Mal3g0331 750 SMART LRR_typ_2 255 279 IPR003591 -
Mal3g0331 750 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 20 147 - -
Mal3g0331 750 Gene3D Transferase(Phosphotransferase) domain 1 522 726 - -
Mal3g0331 750 ProSiteProfiles Protein kinase domain profile. 443 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0331 Mal-Chr3 11795371 11798104 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0331 90 615 Receptor kinase-like Gene Family AT4G08850 39.162 6.69e-115 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal3g0331 Pkinase 3.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0331 - - mtr:MTR_7g009970 952.97