Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0323 ATGAAAAGAATATATGCTGACAGGCCAGTGGTGACTCTTAAATATGTTTTAGATTATCTGAGGAAGCTGAAGACTCGATTTCCAAATGATAGGCATGTGCTTCAGTCGTTTCTAGACATAGTGACAGAGATGAGAGAAAAGAGTATTGCTGATGTCATTCGAGAGGTTGCTTTACTTTTTGAAGGCCATGATGATCTTATTGATGGGTTTACTTATTATATACGTGGCTATTGA 234 0.3718 MKRIYADRPVVTLKYVLDYLRKLKTRFPNDRHVLQSFLDIVTEMREKSIADVIREVALLFEGHDDLIDGFTYYIRGY* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0323 77 Pfam Paired amphipathic helix repeat 35 73 IPR003822 GO:0006355
Mal3g0323 77 Gene3D Paired amphipathic helix 16 74 IPR036600 GO:0006355
Mal3g0323 77 SUPERFAMILY PAH2 domain 11 74 IPR036600 GO:0006355
Mal3g0323 77 ProSiteProfiles PAH domain profile. 8 77 IPR003822 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0323 11 74 WRKY Transcription Factor Family AT4G12020 33.333 1.60e-06 42.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g0323 PAH 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0323 - K07426 mtr:MTR_5g036820 87.8113