Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0320 ATGAAAGCACATTCTACGGAACATTGTGAAGCTAAAAAGGCTATAGAATTTGTCAATGATGTAAAGCGTAGATTTATTCAAGATAATCAGAGGAATAAGTATGACGTCTTTTTGAAAGTCATAGTAAATTATAAGAAACAAAGGATTGATGATACAAATCTCCTTAAAATATTGAAGGAAATATTTAAAGGTCATAGAGATTTGATATTAAGATTAAACTACTACATGCCAAATGGATATGAAATCAAGCTTCCATTGGAGGAGGAACAATCTTTGGAACATTGTGAAGCTCAAAAGGCCTTAAAATTTGTCCAATTGAAGAGCTTGTGTCTTTTATTAATGGATCAAATGATGGAGAACCTAAGGAGATTAAAACTTGCAAGAATAAAAGAAGAATTGAAGAAAGAAAAAAGACCAACAAAAGAATTCTTCTTTGAAGGAAGAAGATGGTCATGTGGCAAAAATTAA 468 0.3077 MKAHSTEHCEAKKAIEFVNDVKRRFIQDNQRNKYDVFLKVIVNYKKQRIDDTNLLKILKEIFKGHRDLILRLNYYMPNGYEIKLPLEEEQSLEHCEAQKALKFVQLKSLCLLLMDQMMENLRRLKLARIKEELKKEKRPTKEFFFEGRRWSCGKN* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0320 155 ProSiteProfiles PAH domain profile. 2 79 IPR003822 GO:0006355
Mal3g0320 155 PANTHER SIN3B-RELATED 2 106 IPR039774 GO:0003714
Mal3g0320 155 SUPERFAMILY PAH2 domain 8 78 IPR036600 GO:0006355
Mal3g0320 155 Coils Coil 114 134 - -
Mal3g0320 155 Gene3D Paired amphipathic helix 13 77 IPR036600 GO:0006355
Mal3g0320 155 PANTHER PROTEIN, PUTATIVE-RELATED 2 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0320 Mal-Chr3 11366321 11366884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0320 14 89 WRKY Transcription Factor Family AT4G12020 36.842 5.45e-10 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g0320 PAH 6.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0320 K11644 - mtr:MTR_7g013380 142.124