Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0317 ATGAGTGCCTTTAGAATCCTCTCCACTAGTACAATCAAGATTGTAAATGCAGGTGACACAACTGATCGTAAAATCTATTTAACCCCATGGGATCTCCAATTCCTCTTATTCGGAGCCAACCAAAAGGGGTATCTTTATTATCATCCCACGGTTGAAAAGACGTCAAACAAAATTCAACACCTTAAACACTCTATTTCCTCTGTCCTTGCATTTTTCCCACCCTTTGCAGGCCGTCTCGAAATAACCAAACACAAAAATAGCACAATCTCATGTTCCATTGCATGCAACAATGCCGGTGCATTGTTTGTTCATGCAACAGCAGAGAACACATGTGTCGCCGATATAATTGAATCCACCTACCTTCCTCATGTTTTCCATTCCTTCTTTCCACTTAACGGAATTATAAACTATGAAGGTACATCACATCCATTGCTTGCATTCCAAGTGACGGAGTTAGTTGACGGTACTTTTATTAGTTGGTCAATGAATCATGTTGTCATTGACGGTATTTCCACTTTGCATTTCATCAATTCATTGTCCGAAATCTCACGTGGTTGTTGCCATCAAATATCTTTACCTCCAATACTTGAACGTTGGTCTCCAAATGGCATTCAACGTCCCATAATGTTTCCTTGCTTAATAGAGACACCACATAAGAACCATTTCGGTGAAACAAATGTCAATCCACCTGAGAGAATATTCCATTTTACAAAGGAGAATATCACGAGACTCATATTAAAAGCCAACATAGAGGCAGGTACTAGTATCAACAAAATATCTTCCCTGCAAGCAGTTTGCACTCACATTTGGCGCTCTGTGATCCGTTCAAAACAACTTGACCCACGAGAAGAAGTTACTTTTGTGTTGTGTATAAGTGTTAGATCAAGATTGGTACCACCATTGCCAGAGAATTATTTTGGAAATGCTATGGTAGTTTGTGGGGTTACAATGAAAGTTGGGGAGCTATTGGAAGAAGGTGGACTTGGTAAAGGTGCTTTAGAGATGTGCAAGATGATTGCTTTGCATTCTGATGAAAATTTGAAAAATCAATATGAGTCTTGGTCTAGAACACCAAGCTTTATTGGGGTTGATAGCGCGGCCGATAGTAATTCCTTGATCATTAGTGGTGCCCCATTTTTCAATTTTTGTGATATTGATATTGGTTGGGGAAAGCCCGTTACATTTCGAAGTGGAACTACAAATAAAAGTAATGGAAAGATTAGTGTGTTTGCTGGTACGGAAGAAGGTAGTATGGACTTTGAAGTGTGTCTTCCTTACGAGATTTTGGTAGCCATGGGAAATGATTCTGAATTTCTTATGAGTAATGCATCCATTTGGAATCCAGATCCTTTGCAGTTAAATTTAAGGTGCAGCCGATTGTAG 1383 0.3933 MSAFRILSTSTIKIVNAGDTTDRKIYLTPWDLQFLLFGANQKGYLYYHPTVEKTSNKIQHLKHSISSVLAFFPPFAGRLEITKHKNSTISCSIACNNAGALFVHATAENTCVADIIESTYLPHVFHSFFPLNGIINYEGTSHPLLAFQVTELVDGTFISWSMNHVVIDGISTLHFINSLSEISRGCCHQISLPPILERWSPNGIQRPIMFPCLIETPHKNHFGETNVNPPERIFHFTKENITRLILKANIEAGTSINKISSLQAVCTHIWRSVIRSKQLDPREEVTFVLCISVRSRLVPPLPENYFGNAMVVCGVTMKVGELLEEGGLGKGALEMCKMIALHSDENLKNQYESWSRTPSFIGVDSAADSNSLIISGAPFFNFCDIDIGWGKPVTFRSGTTNKSNGKISVFAGTEEGSMDFEVCLPYEILVAMGNDSEFLMSNASIWNPDPLQLNLRCSRL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0317 460 Pfam Transferase family 9 438 - -
Mal3g0317 460 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 4 440 - -
Mal3g0317 460 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 4 440 - -
Mal3g0317 460 Gene3D - 215 432 IPR023213 -
Mal3g0317 460 Gene3D - 4 210 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0317 Mal-Chr3 10966383 10967765 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0317 46 427 Monolignol Biosynthesis Gene Families AT5G48930 26.914 1.01e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0317 - - gmx:100500257 441.81