Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0312 ATGGACAGTGATGATTGTGATCTCTTTTCTATCGTGTGTAGCTGCAAAGCTACCACTCCTACCACCATTTTTGAAACTCCACCTTCAATCCTATCCAGCACCACCACAAATAACATCATAACCTCTCATATCAGCAAATCCTCATGCTGTGATGCTTTTACTTTTACCAAACAAAATAGCTCAGTTCCGATTTCCCCACTTAAACCAAATGACTTTATAGAGCTAGACAAATTAATAATTAGTTTCAATCCCACTGCAACTATCCCTACCACTACTAGCTCCAATATCCCAACCAACATTACCACCACAACAACTATCCCCATCCCCTTAACCACCACCCTCGTTTCCCACATCACCACCAATACCATCACTAATACTAGTTTTCATGAATCCAATAAAAATTCCACCTTTTTTCATTACCCAACACTCATCGAAGAACAACAAATGCAACCAAATGAGTTATCTGATCTAGAAAAAATGATACTCAAATTCTATCCCAACAACACTATCCCCATCTCTACCATCACTACTCCCACCCCTACTACCCCCACTAACATTACTCCTCTAACCACTACCACCACTTTCACTACCCTTAAAACCCCTATCGTGACCCCCAACACCACTACCCTTATCATCCCAACCACCACCGCTACCACGACTACCACTTGTGTTCGTGGAACTAATCAATATCCTACCGTTTCTGATTACCAATTACTCATCGAACAACAACAAATTCAACCAAACCATAACAACAAAGTGTCTGCTTTTGAACCTAATACCAGCCTTGAAATCACAACTGGAAATTTTGGTTGTGCGTTCAACAATCCATCAATTCCACAACGACCCTTGAGACAAAGCAATCAACTACCAATTCTACTACCCCGAACTAGTTCAAGAGTTTTACCAAATACACATCCAGAACAACAAAAATTGAAATCAAGAAAAAGAGAAAATAATAACCAAGTGACTTCGGTGTGCCATGTGAGGGACAATGGGATTTCAGATGATTCGTGGAGATGGAGAAAATATGGACAAAAACCCATTAAAGGGTCTTCACATCCAAGGAGTTACTACAGATGTAGCACTCATAGTGATTGTTCTGCAAGAAAACAAGTAGAAAAAAGCAATACCAATGAGAATACTTATGTTGTGACATATCAAGGAGAACACAATTACAAAAAATTAGCAGTTAATCGAAACTCTGATGTTGGGACATTCTTGAACAAGTCATCAGAGACTAGATTACGCATTGCCACAGAAGTTGGATCTTGCTCAAATGTCGGAAACTTGGATTCTCTTAATGCAGAGATGTTACAATTTGGTCAGCCGAAGTGCAGGAAGGCTCATGTTTACACCGGTCAATTAAAAGTCCCTTATCTAAAAACTGACCTTACAGAGGGTTGTTTACCTGCTGTTGAAGATGTTAGATCTCCCCGAAATTTTGGAATATTGGGTTCACCTAACATGATGATGATGAATTTTGATGATCCAGAGAGCGGTAATTCTCGTGTTTTTACCAATGAATCTGAAATCCCTTGTAGGTCTACAGAATTTATTGGAAGTTCCGACGACGACGTCATTTTGATACCAAACATGACTCCAATGTTAGAGGAATTCTTACTGGACTTAAACCACCTCAATAGAGGTGGTCTATAA 1656 0.3955 MDSDDCDLFSIVCSCKATTPTTIFETPPSILSSTTTNNIITSHISKSSCCDAFTFTKQNSSVPISPLKPNDFIELDKLIISFNPTATIPTTTSSNIPTNITTTTTIPIPLTTTLVSHITTNTITNTSFHESNKNSTFFHYPTLIEEQQMQPNELSDLEKMILKFYPNNTIPISTITTPTPTTPTNITPLTTTTTFTTLKTPIVTPNTTTLIIPTTTATTTTTCVRGTNQYPTVSDYQLLIEQQQIQPNHNNKVSAFEPNTSLEITTGNFGCAFNNPSIPQRPLRQSNQLPILLPRTSSRVLPNTHPEQQKLKSRKRENNNQVTSVCHVRDNGISDDSWRWRKYGQKPIKGSSHPRSYYRCSTHSDCSARKQVEKSNTNENTYVVTYQGEHNYKKLAVNRNSDVGTFLNKSSETRLRIATEVGSCSNVGNLDSLNAEMLQFGQPKCRKAHVYTGQLKVPYLKTDLTEGCLPAVEDVRSPRNFGILGSPNMMMMNFDDPESGNSRVFTNESEIPCRSTEFIGSSDDDVILIPNMTPMLEEFLLDLNHLNRGGL* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0312 551 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 547 IPR044810 GO:0003700
Mal3g0312 551 ProSiteProfiles WRKY domain profile. 329 395 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0312 551 Gene3D WRKY domain 319 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0312 551 Pfam WRKY DNA -binding domain 335 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0312 551 SUPERFAMILY WRKY DNA-binding domain 327 393 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0312 551 MobiDBLite consensus disorder prediction 294 320 - -
Mal3g0312 551 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 5 547 - -
Mal3g0312 551 SMART WRKY_cls 334 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0312 Mal-Chr3 10770285 10772335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0312 263 412 WRKY Transcription Factor Family AT4G01250 40.667 1.08e-26 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g0312 WRKY 7.7e-23 CL0274