Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0282 ATGGTCAAGAACAACGAAGAAAATGAGAAATTTGGGAACACTAAGCTTTCCGGTAAATGTCATTGGAGACCATTTGAAGATGCTAAGCTTAGAAAGCTTGTTGATGAATTTGGTCCTCGCAATTGGAAGAATATTGCTGAACAAATACATGGAAGATCAGGAAGAAGAAGAGAACTTTTGATTTCTCATAGACTTCATGGTAACAAATGGGCACAGATTCGCAAATTATTTCGTGGAAGGACAGACAATGCACTCAAAAATCATTTTCATGTGATCATGGCCAGGAAGCAAAGGGAACTATCACCATCTATTTCGAGAAAGCAAAAAATTGTAGAAGCAAGGGATTATGATTTTGCCAAAAGTTGTCATGTAATGAGAATTTATTCTGAAGGTCACATGGGAAACCGTGTGTTTGATTTCTTAAACAGTAATGTGGGTCAATACAATCATTCATATTCAAATTCAAACATTTCGGTATCTGATTTAGTTGCAGCAAACATGAACAATGAATCAATTCCGGGGGAGAGTGGAAATGTGAGAGATAAGATTAAGGTGTCATTTATTGACTTTCTTGGAGTAGGCGAGTCTTAA 591 0.3655 MVKNNEENEKFGNTKLSGKCHWRPFEDAKLRKLVDEFGPRNWKNIAEQIHGRSGRRRELLISHRLHGNKWAQIRKLFRGRTDNALKNHFHVIMARKQRELSPSISRKQKIVEARDYDFAKSCHVMRIYSEGHMGNRVFDFLNSNVGQYNHSYSNSNISVSDLVAANMNNESIPGESGNVRDKIKVSFIDFLGVGES* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0282 196 Pfam Myb-like DNA-binding domain 21 54 IPR001005 -
Mal3g0282 196 ProSiteProfiles Myb-like domain profile. 22 55 IPR001005 -
Mal3g0282 196 CDD SANT 22 54 IPR001005 -
Mal3g0282 196 Gene3D - 58 117 - -
Mal3g0282 196 SMART sant 18 95 IPR001005 -
Mal3g0282 196 PANTHER MYB PROTEIN-RELATED 6 55 - -
Mal3g0282 196 PANTHER MYB PROTEIN-RELATED 58 108 - -
Mal3g0282 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 97 IPR017930 -
Mal3g0282 196 PANTHER OS08G0435700 PROTEIN 6 55 - -
Mal3g0282 196 PANTHER OS08G0435700 PROTEIN 58 108 - -
Mal3g0282 196 SUPERFAMILY Homeodomain-like 19 93 IPR009057 -
Mal3g0282 196 Gene3D - 19 57 - -
Mal3g0282 196 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 54 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0282 Mal-Chr3 9638305 9640364 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0282 11 194 MYB Transcription Factor Family AT4G33450 34.008 1.17e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g0282 Myb_DNA-binding 8.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0282 K09422 - qsu:111993092 135.961