Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0260 ATGCCCACCTTCTCCTCTCTCCCTAGGTGGATTGGTGGAAACTTGTTTGGAAGGAATCCTAAGAACACAATCAACAACGTTGGTGACAGCAGCGATGACACTGGAATTGTCGTTGTAGATGACAATCCAGTGACAAGCATGGTGGAGTGTTACGCCTGCACACAACCAGGTGTGCCAGCGTTTCACTCCACCAGCTGCGACAGCTGTCACCAACCTGAATACGAAGCATCTGCAGGCTCATATCTAGTCCCAATCCAAAACCGTCCCGGAAAATTCGCAAGAGCAATTTCCAAGCAAAATTGGGGAGTATTAGATCCAAGAAGCAAGCGCGTGCAATTATACAACCGCGCGTTGTTGTTAGCGCGTGGTGTAGCGTTAGCGATTGATCCGTTGTTTTTCTACGCGCTGTCGATAGGAAGAGAAGGGTCGCCGTGTTTGTATATGGATGGTGGTTTAGCGTTGATTGTTACGGTGGCGCGTACGGTGGTTGATGCGGTGCATTTGTTTCATGTTTGGTTGCAGTTTAGATTAGCGTATGTGTCGAGAGAATCGCTTGTTGTTGGATGTGGGAAACTCGTGTGGGACGCACGTGCCATTGCTTCTCATTATCTCAAATCTTTTAAGGGTTTTTGGTTTGATCTTTTCGTTATTCTTCCAGTGCCTCAGGCTGTGTTTTGGCTAGTAGTACCAAAATTGATAAGAGAAGAAAGGATTAAAATCATTATGACCACATTGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTATCATAGCATATCTATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGTACCATTTGGTGGGGATTTGGACTCAATCTCATTGCTTATTTCATTGCTTCTCATGTTGCTGGAGGGTGTTGGTACGTACTTGCGATTCAACGTGTTGCATCATGCCTTCAACAGCAATGTGAAGGAACTGTTGGATGCAATCTCTCTCTCTCATGCTCAGATGAAGTATGCTACAAGTCTTTGTTACCAGAAGGAACCATTGGAAATCCATGTGGTGGAAACTCTACAATGTTGTCAAAGCCTATTTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGCAATTCCTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGAAATGATCTTGAACCAACAAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATTGTACTAAGTGGACTACTACTTTTCACTTTGTTGATTGGTAATATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTAAGATGTCGTGACATGGAATGGTGGATGAAGAGGAGGCAGTTGCCGTCCCGATTAAGACAAAGAGTTCGACATTTTGAACGTCAGAGATGGGCGGCCATGGGAGGAGAAGATGAGATGGAACTGATCAAAGACTTACCTGAGGGTCTGAGGAGAGACATCAAGCGCTATCTTTGCTTGGACCTCATAAAAAAGGTACCGTTGTTTCACAATTTGGATGATCTTATTCTTGACAACATCTGTGATAGGGTGAAGCCTCTTGTCTTCTCTAAAGATGAAAAGATAATTAGGGAAGGTGATCCTGTACCGAGGATGGTGTTCATTGTTCGCGGACGCATAAAGAGTAACCAAAATCTCAGCAAAGGAGTGGTAGCAACTAGTGTCCTTGAACCAGGAGGTTTTTTAGGCGACGAACTACTCTCTTGGTGCCTTAGACGCCCTTTTATAGACCGGCTTCCGGCCTCATCAGCGACATTTGTCTGTCTTGAATCAACCGAAGCATTCGGTCTCGATGCTCAAAACTTGAGGTACATAACCGATCATTTCCGGTACAAATTCGCGAACGAGAGGCTAAAGAGAACTGCGAGATACTACTCGTCGAATTGGAGAACATGGGCTGCAGTCAATATTCAACTTGCTTATAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACTCCTGTAAGGGACAATGGAGGCCCTGAGCGTAGGCTCTTGCAGTATGCTGCAATGTTCATGTCAATTAGGCCACATGATCATCTTGAATGA 2118 0.4438 MPTFSSLPRWIGGNLFGRNPKNTINNVGDSSDDTGIVVVDDNPVTSMVECYACTQPGVPAFHSTSCDSCHQPEYEASAGSYLVPIQNRPGKFARAISKQNWGVLDPRSKRVQLYNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLALIVTVARTVVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYLKSFKGFWFDLFVILPVPQAVFWLVVPKLIREERIKIIMTTLLLIFLFQFLPKVYHSISMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLQQQCEGTVGCNLSLSCSDEVCYKSLLPEGTIGNPCGGNSTMLSKPICLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMKRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKSNQNLSKGVVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDNGGPERRLLQYAAMFMSIRPHDHLE* 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0260 705 SMART cnmp_10 518 644 IPR000595 -
Mal3g0260 705 CDD CAP_ED 518 628 IPR000595 -
Mal3g0260 705 ProSiteProfiles cAMP/cGMP binding motif profile. 518 628 IPR000595 -
Mal3g0260 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 53 705 - -
Mal3g0260 705 Gene3D Jelly Rolls 516 634 IPR014710 -
Mal3g0260 705 SUPERFAMILY Voltage-gated potassium channels 106 439 - -
Mal3g0260 705 Gene3D Helix hairpin bin 444 509 - -
Mal3g0260 705 Pfam Ion transport protein 124 436 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mal3g0260 705 Gene3D - 145 441 - -
Mal3g0260 705 SUPERFAMILY cAMP-binding domain-like 445 632 IPR018490 -
Mal3g0260 705 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0260 Mal-Chr3 8979865 8985270 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0260 41 705 Ion Channels AT5G15410 77.974 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0260 K05391 - gmx:100798823 1196.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0260 3 8979865 8985270 Mal3g0260 3 8979865 8985270 ECH