Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0255 ATGAGTTCCTATTCCAATGAGAAAGTGAACCATGTGGTGGAAACTCACACCCCACAAATAGATGACAATGATACACTTTCAGCCATGGTGCTAGGTGCCAATTTGGTTTTCCCTGCAGTTCTTAATGCTGCAATTCAACTCAACTTGTTTGAAATCATTGGTGATGGATTAATGTCATCTTTTGAAATAGCTTCAAAGTTACAAACTCAACACTCTGATTTGCCGAATAGGCTCGATCGTATGTTGCGCTTGCTTGCAAGCTACTCTCTTCTGTCTGTTTCGAGTCGGACCAATGATGATGGTAGCATGGTGAGAATTTATGGTATCACACCATCTAGTAAATACTTTGTTGGTGATGAAAATGATAGTGGCTATTTGGGGTCAATGACATCTTATTTGTGTCACCCTGCTTTCTTAGGGGTTTGGTTGAATTTCAAGGATGCAGTTATGGATCCACAGATTGACCTATTCAAGAAAGTTCATGGAATATCTATCTTTGAGTACTTCAAGAAAGATCCACAAATAAACGACATATTTAATAAATCAATGACTGATACATGTACACTCCACATGAAAAGAATCCTTGAAATATACAAAGGATTTGAGGGAATATCAACATTAGTCGATGTAGGAGGTGGAAATGGACAAAGTCTCAAAGCAATTATATCAAAATATCCATTAATAAAGCTTGTGTGCCATAATTGGCCAGATGAAAAATGCTTAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCTCCAAATGGTAAGGTCATTATTGTGGAGTTCTTGTCACCAGAAGATCTAGAATCAGTAAATGCATCTAAGATGGTTTCAATTGTTGATAACATCATGTTTATCACTGCTGGTGGTAAGGAAAGAACACCAAAAGAATATGAGAGTTTAGGTAAACAATGTGGCTTTTCTAAACTTCAAGTTGTTTGTCGTGCTTTCTCCATCCTTGGAGTGATGGAGCTTTACAAATAA 984 0.3699 MSSYSNEKVNHVVETHTPQIDDNDTLSAMVLGANLVFPAVLNAAIQLNLFEIIGDGLMSSFEIASKLQTQHSDLPNRLDRMLRLLASYSLLSVSSRTNDDGSMVRIYGITPSSKYFVGDENDSGYLGSMTSYLCHPAFLGVWLNFKDAVMDPQIDLFKKVHGISIFEYFKKDPQINDIFNKSMTDTCTLHMKRILEIYKGFEGISTLVDVGGGNGQSLKAIISKYPLIKLVCHNWPDEKCLEILSNCHKALPPNGKVIIVEFLSPEDLESVNASKMVSIVDNIMFITAGGKERTPKEYESLGKQCGFSKLQVVCRAFSILGVMELYK* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0255 327 PIRSF O-mtase 227 327 IPR016461 GO:0008168
Mal3g0255 327 PIRSF O-mtase 5 231 IPR016461 GO:0008168
Mal3g0255 327 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 229 - -
Mal3g0255 327 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 227 327 - -
Mal3g0255 327 Pfam Dimerisation domain 40 86 IPR012967 GO:0046983
Mal3g0255 327 PANTHER O-METHYLTRANSFERASE 1 229 IPR016461 GO:0008168
Mal3g0255 327 PANTHER O-METHYLTRANSFERASE 227 327 IPR016461 GO:0008168
Mal3g0255 327 Pfam O-methyltransferase domain 142 230 IPR001077 GO:0008171
Mal3g0255 327 SUPERFAMILY "Winged helix" DNA-binding domain 24 120 IPR036390 -
Mal3g0255 327 Gene3D Vaccinia Virus protein VP39 230 316 IPR029063 -
Mal3g0255 327 Gene3D Vaccinia Virus protein VP39 119 229 IPR029063 -
Mal3g0255 327 Gene3D - 5 116 IPR036388 -
Mal3g0255 327 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 327 IPR016461 GO:0008168
Mal3g0255 327 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 324 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0255 Mal-Chr3 8697605 8701732 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0255 21 327 Monolignol Biosynthesis Gene Families AT5G54160 39.943 8.79e-78 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0255 - - gmx:100798295 429.483