Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0254 ATGTCCTATTCCAATGAGAAAGAAAACCATGTGGTGGAAACTCACACCTCACAAATAGATGATAGTGATACACTCTCAGCTATGGTACTAGGTGCCAATATGGTGTTTCCTGCAGTTCTTAACGCTGCAATTGAACTCAATCTATTTGATATCATTGCTAAGGAAAGTAATGGTGGATTCATGTCATCCTTTGAAATTGCTTCAAAGCTACCAACACAACATTCTGATTTACCGAATAGGCTCGATCGTATGTTGCGCTTGCTTGCAAGCTACTCTCTTCTGTCTAGTTCTACTCGGACCAATGATGATGGTAGCATAGTGAGAGTTTATGGGATCACACCTTCTGGTAAATATTTTGTCAATTATGAAAATGGTGATTGTTATTTGGGCTCATTCACATCATATTTGTCTCACCCTGCTTTGTCAATGGTGTGGTTGAATTTTAAGGAAGCAATTATTGATCCAGAGGGGTGA 474 0.3924 MSYSNEKENHVVETHTSQIDDSDTLSAMVLGANMVFPAVLNAAIELNLFDIIAKESNGGFMSSFEIASKLPTQHSDLPNRLDRMLRLLASYSLLSSSTRTNDDGSIVRVYGITPSGKYFVNYENGDCYLGSFTSYLSHPALSMVWLNFKEAIIDPEG* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0254 157 Gene3D - 3 119 IPR036388 -
Mal3g0254 157 SUPERFAMILY "Winged helix" DNA-binding domain 23 122 IPR036390 -
Mal3g0254 157 Pfam Dimerisation domain 39 89 IPR012967 GO:0046983
Mal3g0254 157 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 156 - -
Mal3g0254 157 PANTHER O-METHYLTRANSFERASE 2 156 IPR016461 GO:0008168
Mal3g0254 157 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 157 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0254 Mal-Chr3 8680923 8690334 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0254 14 154 Monolignol Biosynthesis Gene Families AT5G54160 40.426 4.23e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0254 - - gmx:100798295 192.586