Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0251 ATGAGTTCCTATTCCAATGAGAAAGTGAACCATGTGGTGGAAACTCATACCCCACAAATAGATGACAATGATACACTTTCAGCCATGGTGCTAGGTGCCAATTTGGTTTTTCCTGCAGTTCTTAATGCTGCAATTCAACTCAACTTGTTTGAAATCATTGGTGATGAATTCATGTCATCTTTTGAAATTGCTTCAAAGTTACAAACTCAACACTCTGATTTGCCGAATAGGCTCGATCGTATGTTGCGCTTGCTTGCAAGCTACTCTCTTCTGTCTGTTTCTCCTCGGACCAATGATGATGGTAGCATTGTGAGCGTTTATGGGATCACACCTTCTGGTAAATACTTTTGCTATGATCAAAATAGTGATCATGGTTATCTTGGCTCATTCACATCATTCATGTGTCACCCTGCTTTGATAGGGTTGTGA 429 0.4033 MSSYSNEKVNHVVETHTPQIDDNDTLSAMVLGANLVFPAVLNAAIQLNLFEIIGDEFMSSFEIASKLQTQHSDLPNRLDRMLRLLASYSLLSVSPRTNDDGSIVSVYGITPSGKYFCYDQNSDHGYLGSFTSFMCHPALIGL* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0251 142 PANTHER O-METHYLTRANSFERASE 1 142 IPR016461 GO:0008168
Mal3g0251 142 Pfam Dimerisation domain 40 86 IPR012967 GO:0046983
Mal3g0251 142 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 142 IPR016461 GO:0008168
Mal3g0251 142 Gene3D - 4 116 IPR036388 -
Mal3g0251 142 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 142 - -
Mal3g0251 142 SUPERFAMILY "Winged helix" DNA-binding domain 24 120 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0251 Mal-Chr3 8468559 8468987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0251 21 121 Monolignol Biosynthesis Gene Families AT5G54160 40.777 3.89e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0251 - - gmx:100798295 176.792