Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0242 ATGTCAACCACCACCCCTTCCTCCGCCGACACGGCGTCACCACCACAACCACCGCCCCGACCCACTATCACCCTCCCACCACGTCCCTCCGTTGAAGCATTCTTCTCTTCCACCGCCGTCAGTCCTGGTCCCATGACACTAGTTTCAAGCTTCTTTGCAACTGAATCCGCCACCTTCTCTCAGCTTCTCGCCGGTGCTATGGCTTCTCCTCTTGCCTTCTCTTCCTCCTCCGCCTCTGCCGTTGAGTATGGTTTTGGTAAAGATGATGATGGTGGGTCACATGGTGGTTTTAAACAAAGTAGACCTATGAATTTGGTTATTGCTCGTTCTCCTGTTTTTACTGTTCCTCCTGGTTTGAGTCCTTCTGGATTTCTTAACTCTCCTGGGTTCTTTTCTCCTCAGAGTCCCTTTGGAATGTCACACCAACAGGCTTTAGCACAGGTTACAGCTCAAGCTGTCCTAGCACAATCTCAAAATATGCACATGCAACATGAATACCAGCCGGTCTCATTCGAACCTCCCACCGAACGACTGGTTGAGCAGCCGTCTTTCACTCAAAATGATGCTTTGGAGCAGCAAGTGGCAGTACCTGTATCAGAACCTAGAAATGCTCAAATGGAAACGTCAGAGATTACACATTCTGATAAGAAATATCAACCATCTTCCCTACCTATTGACAAACCTGCAGATGACGGCTACAACTGGCGTAAGTATGGACAGAAGCAGGTTAAAGGGAGTGAGTATCCACGGAGCTACTACAAATGCACACATCTGAATTGTCCCGTGAAGAAAAAAGTTGAGCGTGCACCTGACGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAACCATGAGAAGCCTCAGGCGAGTAGGCGGGTCAAAGAAAACAATAGTGACTTGAATGGAAATGCAAATGTTCAACCTAAGTCTGACTCAAACTCACAAGGCTGGTATGGAAATTCAAACAAAATTAGTGAGAGTGTGCCTGATTCTTCGCTGCCAGAGCCTGAGAGTGACCTGACATCCAATCAAGGGGCTCCCAGACCACGACCTGGATCAAGTGAGAGTGAGGAAGTTGGTAATGCAGAGAATAAGGAAGAGGGAGTTGACTGTGAGCCAAACCCTAAGAGAAGGAGCACTGAACCTGCGGTTCCTGAAGTACCTCCATCTCAGAAGACTGTCACAGAACCTAAAATTATTGTGCAAACAAGAAGTGAAGTTGATCTTTTGGATGATGGCTACAGGTGGAGAAAGTATGGTCAGAAAGTGGTGAAGGGAAATCCTCATCCAAGGAGTTATTACAAGTGCACTAGTGCAGGCTGCAACGTGCGCAAACATGTTGAGAGAGCATCAACGGACGCAAAAGCTGTCATAACTACGTACGAGGGAAAACATAATCACGATGTCCCAGCTGCAAGAAACAGCAGCCACAACACAGCTAGTAGCAATTCAATGCCATCAAAACCACAGGCTCTGGTGCCAGAAAAGCACCCTTTGCTGAAAGATATGGAGTTTGGAAACAACGATCAAAGACCGGTACATTTACGCTTAAAAGAAGAGCAAATCATTGTATAA 1578 0.4677 MSTTTPSSADTASPPQPPPRPTITLPPRPSVEAFFSSTAVSPGPMTLVSSFFATESATFSQLLAGAMASPLAFSSSSASAVEYGFGKDDDGGSHGGFKQSRPMNLVIARSPVFTVPPGLSPSGFLNSPGFFSPQSPFGMSHQQALAQVTAQAVLAQSQNMHMQHEYQPVSFEPPTERLVEQPSFTQNDALEQQVAVPVSEPRNAQMETSEITHSDKKYQPSSLPIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHEKPQASRRVKENNSDLNGNANVQPKSDSNSQGWYGNSNKISESVPDSSLPEPESDLTSNQGAPRPRPGSSESEEVGNAENKEEGVDCEPNPKRRSTEPAVPEVPPSQKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDAKAVITTYEGKHNHDVPAARNSSHNTASSNSMPSKPQALVPEKHPLLKDMEFGNNDQRPVHLRLKEEQIIV* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0242 525 MobiDBLite consensus disorder prediction 360 380 - -
Mal3g0242 525 ProSiteProfiles WRKY domain profile. 406 471 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 Pfam WRKY DNA -binding domain 230 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 Pfam WRKY DNA -binding domain 412 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 MobiDBLite consensus disorder prediction 295 351 - -
Mal3g0242 525 SUPERFAMILY WRKY DNA-binding domain 403 471 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 SUPERFAMILY WRKY DNA-binding domain 228 288 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 MobiDBLite consensus disorder prediction 467 492 - -
Mal3g0242 525 MobiDBLite consensus disorder prediction 197 234 - -
Mal3g0242 525 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 524 IPR044810 GO:0003700
Mal3g0242 525 MobiDBLite consensus disorder prediction 274 294 - -
Mal3g0242 525 SMART WRKY_cls 411 470 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 SMART WRKY_cls 229 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 ProSiteProfiles WRKY domain profile. 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 MobiDBLite consensus disorder prediction 274 397 - -
Mal3g0242 525 MobiDBLite consensus disorder prediction 11 26 - -
Mal3g0242 525 MobiDBLite consensus disorder prediction 473 490 - -
Mal3g0242 525 PANTHER WRKY PROTEIN 15 524 - -
Mal3g0242 525 MobiDBLite consensus disorder prediction 1 29 - -
Mal3g0242 525 Gene3D WRKY domain 221 289 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mal3g0242 525 Gene3D WRKY domain 396 472 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0242 Mal-Chr3 8318999 8326135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0242 20 523 WRKY Transcription Factor Family AT2G03340 52.720 2.63e-145 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mal3g0242 WRKY 4.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0242 - - gmx:100796679 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0242 3 8318999 8326135 Mal3g0242 3 8318999 8326135 ECH