Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0209 ATGGGGAGATCACCATGTTGTGAAAAAGTTGGTTTAAAGAAAGGACCATGGACACCTGAGGAAGATCAAAAGCTCTTATCTTACATTGAAGAACATGGTCATGGAAGCTGGCGTGCTTTGCCAACAAAAGCCGGACTTGAGAGGTGTGGCAAGAGCTGCAGACTAAGATGGACAAATTATCTAAGGCCTGATATTAAGAGGGGAAAGTTTACTTTGCAAGAAGAACAAACCATTATTCAACTTCATGCACTTTTAGGCAACAGGTGGTCATCAATAGCCACACATTTGCCTAAGAGAACAGATAATGAAATCAAGAACTATTGGAACACACATCTTAAGAAAAGATTAACAAAACTTGGAATTGATCCTGTTACTCACAAGCCAAAAAATGAAACCCTTTCCTCTGAAAATCATTCCAAGAATGCTGCAAATCTTAGTCACATGGCTCAATGGGAAAGTGCAAGACTTGAAGCTGAAGCAAGATTGGTTAGAGAATCAAAGCTACGTTCACAATATTCATTGCAACAACATCAACTTGGAAGTAATAATTCAGTTTTTCCATCACAATCGTCATCATCTGCATCATCATCTTCAAATCAAGTCCTTAACATTAAAGAAGAAGGTGAGAAAGAGTGGAAAGGTTATGAAGATTCAACACATTTGTTAGAATTCAAAGATTTGATGGAGAATTCATCCATGGCTTTTAGCCCTACATTGCAGCATGAGATGACAATGATTAGTGTTGCTGAGGAGGGTTTCACTAATCTCTTGCTTGATAATTCTAACTCCGGTGACCCCAGTTTGTCCCCGGAGAGCGGTGGAGAGTGTATTACTTGTGATGGAAGTGGTAGCGGCGGTGGCAATGGCGGTGGAAGTGATTTTTGTGAAGATAACAAGAACTACTGGAACAACATTCTTAATTTAGTTAATTCAACGCCTTCTGATTCACCAATGTTCTAA 960 0.3937 MGRSPCCEKVGLKKGPWTPEEDQKLLSYIEEHGHGSWRALPTKAGLERCGKSCRLRWTNYLRPDIKRGKFTLQEEQTIIQLHALLGNRWSSIATHLPKRTDNEIKNYWNTHLKKRLTKLGIDPVTHKPKNETLSSENHSKNAANLSHMAQWESARLEAEARLVRESKLRSQYSLQQHQLGSNNSVFPSQSSSSASSSSNQVLNIKEEGEKEWKGYEDSTHLLEFKDLMENSSMAFSPTLQHEMTMISVAEEGFTNLLLDNSNSGDPSLSPESGGECITCDGSGSGGGNGGGSDFCEDNKNYWNNILNLVNSTPSDSPMF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0209 319 CDD SANT 69 112 IPR001005 -
Mal3g0209 319 MobiDBLite consensus disorder prediction 173 202 - -
Mal3g0209 319 CDD SANT 16 61 IPR001005 -
Mal3g0209 319 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 191 - -
Mal3g0209 319 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 196 313 - -
Mal3g0209 319 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mal3g0209 319 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mal3g0209 319 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mal3g0209 319 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mal3g0209 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mal3g0209 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 191 - -
Mal3g0209 319 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 196 313 - -
Mal3g0209 319 Gene3D - 69 116 - -
Mal3g0209 319 Gene3D - 13 66 - -
Mal3g0209 319 SMART sant 66 114 IPR001005 -
Mal3g0209 319 SMART sant 13 63 IPR001005 -
Mal3g0209 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mal3g0209 319 MobiDBLite consensus disorder prediction 122 141 - -
Mal3g0209 319 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0209 Mal-Chr3 7356142 7358989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0209 1 319 MYB Transcription Factor Family AT3G01140 56.233 2.72e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g0209 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0209 K09422 - gmx:100781637 404.06